diff --git a/requirements.txt b/requirements.txt new file mode 100644 index 0000000..9061c02 --- /dev/null +++ b/requirements.txt @@ -0,0 +1,5 @@ +cupy +sparsebm +numpy +pandas +matplotlib \ No newline at end of file diff --git a/sparselbm_full_mat.py b/sparselbm_full_mat.py new file mode 100644 index 0000000..6f9cae8 --- /dev/null +++ b/sparselbm_full_mat.py @@ -0,0 +1,5 @@ +import numpy as np +import pandas as pd + +# Load matrix from csv file +pd.read_csv("data/otu_matrix.csv.zip", compression="zip", index_col=0).to_numpy() \ No newline at end of file