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The real fix on save_dir creation

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Louis 2026-02-24 09:43:28 +01:00
parent a8bdeecb3a
commit 88024bd343
1 changed files with 4 additions and 4 deletions
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8
blockmodels_correct_sampling_effort.R
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@ -23,11 +23,11 @@ the_data <- import_biom(here("data", author, paste0(author, ".biom")))
epoch <- as.integer(Sys.time())
level <- 2
message("At level: ", level, " starting at: ", epoch)
save_dir <- here("results", "seq-effort")
save_path <- here(save_dir, paste0(author, "_", level, "_", epoch, ".Rds"))
save_path <- here("results", "seq-effort", paste0(author, "_", level, "_", epoch, ".Rds"))
if (!dir.exists(save_path)) {
dir.create(save_path, recursive = TRUE)
if (!dir.exists(save_dir)) {
dir.create(save_dir, recursive = TRUE)
}
per_taxa_networks <- collapse_otu_at_taxo(the_data)