applications : ajout graph et interpret Baldock
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@ -34,4 +34,34 @@ the corresponding model was not selected at all.
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\pagestyle{empty}
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\input{../tables/simulations/model_selection/model-selection.tex}
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\end{landscape}
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\pagestyle{fancy}
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\pagestyle{fancy}
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\chapter{Supplementary for~\nameref{chap:applications-ecological-networks}}
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\section{Additional information on~\nameref{sec:baldock-clustering}}
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Due to report size limitations we included these plots here as they are not crucial to understand what is going on in
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the section~\ref{sec:baldock-clustering}.
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Yet they are useful to confirm the explanation given.
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\begin{figure}[!ht]
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\centering
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\begin{subfigure}[htb]{\textwidth}
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\centering
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\includestandalone[width=0.6\textwidth]{tikz/applications/baldock/app-iid-clust-struct-1}
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\caption{Small collection structure}
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\end{subfigure}
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\newline
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\begin{subfigure}[htb]{\textwidth}
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\includestandalone[width=0.9\textwidth]{tikz/applications/baldock/app-iid-clust-struct-2}
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\caption{English networks collection structure}
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\end{subfigure}
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\caption{Structure and mixture proportions for \emph{iid} clustering}
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\label{fig:struct-mixture-iid}
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\end{figure}
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\begin{figure}[!ht]
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\centering
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\includestandalone{tikz/applications/baldock/app-pirho-clust-struct}
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\caption{Structure and mixture proportions for $\pi\rho$ clustering}
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\label{fig:struct-mixture-pirho}
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\end{figure}
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@ -1,5 +1,6 @@
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\section{Clustering
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of~\cite{baldockSystemsApproachReveals2019a,baldockDailyTemporalStructure2011}}
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\label{sec:baldock-clustering}
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\cite{baldockSystemsApproachReveals2019a} study the diversity, robustness and
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impact of the type of environment on the ecological aspect of plant-pollinator
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@ -95,4 +96,22 @@ and~\ref{fig:baldock-clust-pirho}.
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\paragraph{Results} The main thing one can see when comparing the two
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clusterings is that while \emph{iid} do not find a common structure, $\pi\rho$
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manage to find one.
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manage to find one.
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When comparing figures~\ref{subfig:baldock-clust-iid-struct}
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and~\ref{subfig:baldock-clust-pirho-struct} and confirming with the
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figures~\ref{fig:struct-mixture-iid},~\ref{fig:struct-mixture-pirho}
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in appendix we can deduce the following differences between the two models.
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The TB+JN network doesn't have the \nth{3} column block and the first and second column blocks coincides with the English networks. But interestingly, the \nth{3} column block is the larger one in the English networks.
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For the row blocks, where with the \emph{iid} model only two groups where detected in the African network, it is refined with the $\pi\rho$ detecting 4 blocks in its row nodes. The African network does not have the first row block, a few row nodes in row blocks 2 and 3, more in the \nth{4} block and the majority in the \nth{5}.
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This contrasts, once again, with the English networks that have the majority of their row nodes in the \nth{4} block.
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Two interesting points can be made with those results, firstly the $\pi\rho$
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collection model allowed the detection of a finer structure in the African
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network regarding the row block memberships. And secondly, whereas the English
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networks are really similar, the African network while presenting the same
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blocks fills them differently.
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Those observations invite us to look at the species that are in those different
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groups.
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tikz/applications/baldock/app-iid-clust-struct-1.tex
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tikz/applications/baldock/app-iid-clust-struct-1.tex
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@ -0,0 +1,496 @@
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|
||||
\node[text=drawColor,text opacity=0.00,anchor=base,inner sep=0pt, outer sep=0pt, scale= 1.10] at (113.05, 7.64) {y};
|
||||
\end{scope}
|
||||
\end{tikzpicture}
|
||||
|
||||
|
|
|
|||
Loading…
Add table
Reference in a new issue