rapport : na robustness interp

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Louis Lacoste 2024-07-25 20:05:33 +02:00
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commit ef87a7cc7a
6 changed files with 5605 additions and 5596 deletions

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@ -23,11 +23,11 @@ $\bm{\alpha}$,
0.05 & 0.2 & 0.05 \\ 0.05 & 0.2 & 0.05 \\
0.05 & 0.05 & 0.8 0.05 & 0.05 & 0.8
\end{pmatrix}, & \end{pmatrix}, &
\bm{\alpha}^{nested} = \begin{pmatrix} ~\bm{\alpha}^{nested} = \begin{pmatrix}
0.9 & 0.25 & 0.1 \\ 0.9 & 0.65 & 0.1 \\
0.3 & 0.15 & 0.05 \\ 0.35 & 0.15 & 0.05 \\
0.1 & 0.05 & 0.05 0.1 & 0.05 & 0.05
\end{pmatrix}, \end{pmatrix},
\end{align*} \end{align*}
where $\bm{\alpha}^{modular}$ represents networks where there are look-a-like where $\bm{\alpha}^{modular}$ represents networks where there are look-a-like
@ -37,7 +37,7 @@ structure detected in ecology with generalist and specialist species and a
\enquote{nested} structure. \enquote{nested} structure.
The collections contain two networks ($M=2$) of size $n^{m=1}_1 = The collections contain two networks ($M=2$) of size $n^{m=1}_1 =
n^{m=1}_2 = 40$ and n^{m=1}_2 = 20$ and
$n^{m=2}_1 = n^{m=2}_2 = 120$. One collection is generated for each colBiSBM $n^{m=2}_1 = n^{m=2}_2 = 120$. One collection is generated for each colBiSBM
model. And the nodes block memberships (i.e., the row and column blocks they model. And the nodes block memberships (i.e., the row and column blocks they
belong to) are saved. belong to) are saved.
@ -85,22 +85,25 @@ corresponding \emph{model}. We will compare the results for one model box plot
to the corresponding sep-model box plot, serving as a baseline. to the corresponding sep-model box plot, serving as a baseline.
% TODO the ARI interpretation % TODO the ARI interpretation
For the figure~\ref{fig:ari-dim-plot-na}, in almost all cases For the figure~\ref{fig:ari-dim-plot-na}, our models almost always do at least
as good as the sep counterpart. The $iid$ model is the only one for which the
sep performs better on the columns block memberships.
The nested structure seems to complexify the block membership attribution with
only ARI less than 0.75
For the figure~\ref{fig:auc-plot}, overall we observe results similar to For the figure~\ref{fig:auc-plot}, in almost all cases and for almost
the ARIs, namely our models tend to have a slightly better AUC than their all models the differences are not significant but our models seems to perform
corresponding LBM. marginally better and are only a few times under their LBM counterpart.
This indicates that link prediction benefits from the collection model This indicates that information is transferred from the bigger network when estimating the parameters and predicting link values.
in almost all cases.
We may even be able to improve the results by using larger collections.
For the cases where our models do not perform better, we observe that On the differences between nested and modular structures, the latter shows
$\pi\rho$-colBiSBM in a smaller variance in the AUC with our models predictions contained between
the modular case seems to do slightly worse than its LBM counterpart for the 0.7 and 0.9. Whereas for the nested structure, $iid$ and $\pi$ models are
first values of $p_{\texttt{NA}}$. The $\rho$-colBiSBM seem to suffer from the in quite similar value ranges with small variances but $\rho$ and
same problem, and encounters it too for some values with the nested structure. $\pi\rho$ present smaller values and larger variances.
This may have to do with our simulation parameters giving for this models
cases that are harder.
Or this may be due to mis-attribution of the block memberships resulting in
wrong predictions.
An explanation for the cases in which our models return lower values than
expected could be to look for in our simulation parameters. They may, combined
with the $\rho$ model be a difficult case for the estimation.
As we currently do not have identifiability results this is just and
hypothesis.

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