% Options for packages loaded elsewhere \PassOptionsToPackage{unicode}{hyperref} \PassOptionsToPackage{hyphens}{url} % \documentclass[ ]{article} \usepackage{lmodern} \usepackage{amssymb,amsmath} \usepackage{ifxetex,ifluatex} \ifnum 0\ifxetex 1\fi\ifluatex 1\fi=0 % if pdftex \usepackage[T1]{fontenc} \usepackage[utf8]{inputenc} \usepackage{textcomp} % provide euro and other symbols \else % if luatex or xetex \usepackage{unicode-math} \defaultfontfeatures{Scale=MatchLowercase} \defaultfontfeatures[\rmfamily]{Ligatures=TeX,Scale=1} \fi % Use upquote if available, for straight quotes in verbatim environments \IfFileExists{upquote.sty}{\usepackage{upquote}}{} \IfFileExists{microtype.sty}{% use microtype if available \usepackage[]{microtype} \UseMicrotypeSet[protrusion]{basicmath} % disable protrusion for tt fonts }{} \makeatletter \@ifundefined{KOMAClassName}{% if non-KOMA class \IfFileExists{parskip.sty}{% \usepackage{parskip} }{% else \setlength{\parindent}{0pt} \setlength{\parskip}{6pt plus 2pt minus 1pt}} }{% if KOMA class \KOMAoptions{parskip=half}} \makeatother \usepackage{xcolor} \IfFileExists{xurl.sty}{\usepackage{xurl}}{} % add URL line breaks if available \IfFileExists{bookmark.sty}{\usepackage{bookmark}}{\usepackage{hyperref}} \hypersetup{ pdftitle={Analyzing the capacity of the colBiSBM to recover structure for missing data from other networks}, hidelinks, pdfcreator={LaTeX via pandoc}} \urlstyle{same} % disable monospaced font for URLs \usepackage[margin=1in]{geometry} \usepackage{graphicx} \makeatletter \def\maxwidth{\ifdim\Gin@nat@width>\linewidth\linewidth\else\Gin@nat@width\fi} \def\maxheight{\ifdim\Gin@nat@height>\textheight\textheight\else\Gin@nat@height\fi} \makeatother % Scale images if necessary, so that they will not overflow the page % margins by default, and it is still possible to overwrite the defaults % using explicit options in \includegraphics[width, height, ...]{} \setkeys{Gin}{width=\maxwidth,height=\maxheight,keepaspectratio} % Set default figure placement to htbp \makeatletter \def\fps@figure{htbp} \makeatother \setlength{\emergencystretch}{3em} % prevent overfull lines \providecommand{\tightlist}{% \setlength{\itemsep}{0pt}\setlength{\parskip}{0pt}} \setcounter{secnumdepth}{-\maxdimen} % remove section numbering \title{Analyzing the capacity of the colBiSBM to recover structure for missing data from other networks} \author{} \date{\vspace{-2.5em}} \begin{document} \maketitle \begin{verbatim} ## `summarise()` has grouped output by 'prop_NAs'. You can override using the ## `.groups` argument. \end{verbatim} \hypertarget{simulation-context}{% \section{Simulation context}\label{simulation-context}} The idea is to benchmark the capacity of the models when NAs are in the data. To do this, whe choose the below structure: ! PARAMETERS OF THE SIMULATION ! And set some randomly chosen interactions to NA. The below plots will show the different quality indicators in function of proportion of NAs in the first of the 3 networks. \hypertarget{auc-in-function-of-the-proportion-of-nas}{% \section{AUC in function of the proportion of NAs}\label{auc-in-function-of-the-proportion-of-nas}} \includegraphics{NA_robustness_analyse_files/figure-latex/auc_plots-1.pdf} \hypertarget{ari-in-function-of-the-proportion-of-nas}{% \section{ARI in function of the proportion of NAs}\label{ari-in-function-of-the-proportion-of-nas}} \begin{figure} \centering \includegraphics{NA_robustness_analyse_files/figure-latex/ARI_row_plot-1.pdf} \caption{Difference of ARI for the row clusterings} \end{figure} \begin{figure} \centering \includegraphics{NA_robustness_analyse_files/figure-latex/ARI_col_plot-1.pdf} \caption{Difference of ARI for the columns clusterings} \end{figure} \end{document}