110 lines
3.7 KiB
TeX
110 lines
3.7 KiB
TeX
% Options for packages loaded elsewhere
|
|
\PassOptionsToPackage{unicode}{hyperref}
|
|
\PassOptionsToPackage{hyphens}{url}
|
|
%
|
|
\documentclass[
|
|
]{article}
|
|
\usepackage{lmodern}
|
|
\usepackage{amssymb,amsmath}
|
|
\usepackage{ifxetex,ifluatex}
|
|
\ifnum 0\ifxetex 1\fi\ifluatex 1\fi=0 % if pdftex
|
|
\usepackage[T1]{fontenc}
|
|
\usepackage[utf8]{inputenc}
|
|
\usepackage{textcomp} % provide euro and other symbols
|
|
\else % if luatex or xetex
|
|
\usepackage{unicode-math}
|
|
\defaultfontfeatures{Scale=MatchLowercase}
|
|
\defaultfontfeatures[\rmfamily]{Ligatures=TeX,Scale=1}
|
|
\fi
|
|
% Use upquote if available, for straight quotes in verbatim environments
|
|
\IfFileExists{upquote.sty}{\usepackage{upquote}}{}
|
|
\IfFileExists{microtype.sty}{% use microtype if available
|
|
\usepackage[]{microtype}
|
|
\UseMicrotypeSet[protrusion]{basicmath} % disable protrusion for tt fonts
|
|
}{}
|
|
\makeatletter
|
|
\@ifundefined{KOMAClassName}{% if non-KOMA class
|
|
\IfFileExists{parskip.sty}{%
|
|
\usepackage{parskip}
|
|
}{% else
|
|
\setlength{\parindent}{0pt}
|
|
\setlength{\parskip}{6pt plus 2pt minus 1pt}}
|
|
}{% if KOMA class
|
|
\KOMAoptions{parskip=half}}
|
|
\makeatother
|
|
\usepackage{xcolor}
|
|
\IfFileExists{xurl.sty}{\usepackage{xurl}}{} % add URL line breaks if available
|
|
\IfFileExists{bookmark.sty}{\usepackage{bookmark}}{\usepackage{hyperref}}
|
|
\hypersetup{
|
|
pdftitle={Analyzing the capacity of the colBiSBM to recover structure for missing data from other networks},
|
|
hidelinks,
|
|
pdfcreator={LaTeX via pandoc}}
|
|
\urlstyle{same} % disable monospaced font for URLs
|
|
\usepackage[margin=1in]{geometry}
|
|
\usepackage{graphicx}
|
|
\makeatletter
|
|
\def\maxwidth{\ifdim\Gin@nat@width>\linewidth\linewidth\else\Gin@nat@width\fi}
|
|
\def\maxheight{\ifdim\Gin@nat@height>\textheight\textheight\else\Gin@nat@height\fi}
|
|
\makeatother
|
|
% Scale images if necessary, so that they will not overflow the page
|
|
% margins by default, and it is still possible to overwrite the defaults
|
|
% using explicit options in \includegraphics[width, height, ...]{}
|
|
\setkeys{Gin}{width=\maxwidth,height=\maxheight,keepaspectratio}
|
|
% Set default figure placement to htbp
|
|
\makeatletter
|
|
\def\fps@figure{htbp}
|
|
\makeatother
|
|
\setlength{\emergencystretch}{3em} % prevent overfull lines
|
|
\providecommand{\tightlist}{%
|
|
\setlength{\itemsep}{0pt}\setlength{\parskip}{0pt}}
|
|
\setcounter{secnumdepth}{-\maxdimen} % remove section numbering
|
|
|
|
\title{Analyzing the capacity of the colBiSBM to recover structure for
|
|
missing data from other networks}
|
|
\author{}
|
|
\date{\vspace{-2.5em}}
|
|
|
|
\begin{document}
|
|
\maketitle
|
|
|
|
\begin{verbatim}
|
|
## `summarise()` has grouped output by 'prop_NAs'. You can override using the
|
|
## `.groups` argument.
|
|
\end{verbatim}
|
|
|
|
\hypertarget{simulation-context}{%
|
|
\section{Simulation context}\label{simulation-context}}
|
|
|
|
The idea is to benchmark the capacity of the models when NAs are in the
|
|
data.
|
|
|
|
To do this, whe choose the below structure: ! PARAMETERS OF THE
|
|
SIMULATION !
|
|
|
|
And set some randomly chosen interactions to NA. The below plots will
|
|
show the different quality indicators in function of proportion of NAs
|
|
in the first of the 3 networks.
|
|
|
|
\hypertarget{auc-in-function-of-the-proportion-of-nas}{%
|
|
\section{AUC in function of the proportion of
|
|
NAs}\label{auc-in-function-of-the-proportion-of-nas}}
|
|
|
|
\includegraphics{NA_robustness_analyse_files/figure-latex/auc_plots-1.pdf}
|
|
|
|
\hypertarget{ari-in-function-of-the-proportion-of-nas}{%
|
|
\section{ARI in function of the proportion of
|
|
NAs}\label{ari-in-function-of-the-proportion-of-nas}}
|
|
|
|
\begin{figure}
|
|
\centering
|
|
\includegraphics{NA_robustness_analyse_files/figure-latex/ARI_row_plot-1.pdf}
|
|
\caption{Difference of ARI for the row clusterings}
|
|
\end{figure}
|
|
|
|
\begin{figure}
|
|
\centering
|
|
\includegraphics{NA_robustness_analyse_files/figure-latex/ARI_col_plot-1.pdf}
|
|
\caption{Difference of ARI for the columns clusterings}
|
|
\end{figure}
|
|
|
|
\end{document}
|