simulations : netclustering adding missing here library

code/simulations/simulations_network_clustering.R

@@ -1,4 +1,5 @@
 necessary_packages <- c("remotes", "colSBM")
+library(here)
 
 if (!all(necessary_packages %in% installed.packages())) {
     install.packages(necessary_packages[-length(necessary_packages)])
@@ -19,6 +20,27 @@ repetitions <- seq.int(30)
 epsilons <- seq(0.1, 0.4, by = 0.1)
 models <- c("iid", "pi", "rho", "pirho")
 
+save_folder <- here(
+    "code", "results", "simulations", "clustering",
+    "9collection"
+)
+
+if (!dir.exists(save_folder)) {
+    dir.create(save_folder)
+}
+
+save_filename <- paste0(
+    "9collection_data_clustering_",
+    format(Sys.time(), "%d-%m-%y-%H-%M-%S"),
+    ".Rds"
+)
+
+temp_folder <- file.path(save_folder, paste0("tmp", format(Sys.time(), "%d-%m-%y-%H-%M-%S")))
+
+if (!dir.exists(temp_folder)) {
+    dir.create(temp_folder)
+}
+
 conditions <- tidyr::crossing(epsilons, repetitions, models)
 results <- future.apply::future_lapply(
     seq_len(nrow(conditions)), function(s) {
@@ -197,30 +219,20 @@ results <- future.apply::future_lapply(
         # ARI computation
         clustering <- clustering[order(names(clustering))]
         ari <- aricode::ARI(rep(c(1, 2, 3), each = 3), clustering)
+        out <- data.frame(epsilon = eps, model = current_model, ARI = ari)
 
-        return(
-            data.frame(epsilon = eps, model = current_model, ARI = ari)
-        )
+        saveRDS(out, file = file.path(
+            temp_folder,
+            paste0("condition_", s, "_on_", nrow(conditions), ".Rds")
+        ))
+
+        return(out)
     },
     future.seed = NULL
 )
 
 data_frame_result <- do.call("rbind", results)
 
-save_folder <- here(
-    "code", "results", "simulations", "clustering",
-    "9collection"
-)
-
-if (!dir.exists(save_folder)) {
-    dir.create(save_folder)
-}
-save_filename <- paste0(
-    "9collection_data_clustering_",
-    format(Sys.time(), "%d-%m-%y-%H-%M-%S"),
-    ".Rds"
-)
-
 saveRDS(data_frame_result, file = file.path(
     save_folder,
     save_filename