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Woodpecker CI 2026-01-05 13:06:52 +00:00
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@ -224,14 +224,14 @@ window.Quarto = {
<div> <div>
<div class="quarto-title-meta-heading">Date de publication</div> <div class="quarto-title-meta-heading">Date de publication</div>
<div class="quarto-title-meta-contents"> <div class="quarto-title-meta-contents">
<p class="date">23 décembre 2025</p> <p class="date">5 janvier 2026</p>
</div> </div>
</div> </div>
<div> <div>
<div class="quarto-title-meta-heading">Modifié</div> <div class="quarto-title-meta-heading">Modifié</div>
<div class="quarto-title-meta-contents"> <div class="quarto-title-meta-contents">
<p class="date-modified">23 décembre 2025</p> <p class="date-modified">5 janvier 2026</p>
</div> </div>
</div> </div>
@ -263,10 +263,10 @@ Agenda
<h2 class="anchored" data-anchor-id="journaux">Journaux</h2> <h2 class="anchored" data-anchor-id="journaux">Journaux</h2>
<div id="listing-journal-these" class="quarto-listing quarto-listing-container-default"> <div id="listing-journal-these" class="quarto-listing quarto-listing-container-default">
<div class="list quarto-listing-default"> <div class="list quarto-listing-default">
<div class="quarto-post image-right" data-index="0" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1766102400000" data-listing-file-modified-sort="1766494258619" data-listing-date-modified-sort="1766494258000" data-listing-reading-time-sort="8" data-listing-word-count-sort="1452"> <div class="quarto-post image-right" data-index="0" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1766102400000" data-listing-file-modified-sort="1767618319848" data-listing-date-modified-sort="1767618319000" data-listing-reading-time-sort="8" data-listing-word-count-sort="1455">
<div class="thumbnail"><a href="./suivi/2025-51/2025-51.html" class="no-external"> <div class="thumbnail"><a href="./suivi/2025-51/2025-51.html" class="no-external">
<div class="listing-item-img-placeholder card-img-top" >&nbsp;</div> <p class="card-img-top"><img src="suivi/2025-51/figs/tendance_temps.png" class="thumbnail-image card-img"/></p>
</a></div> </a></div>
<div class="body"> <div class="body">
@ -297,7 +297,7 @@ Louis Lacoste
</a> </a>
</div> </div>
</div> </div>
<div class="quarto-post image-right" data-index="1" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1765497600000" data-listing-file-modified-sort="1766494258619" data-listing-date-modified-sort="1766494258000" data-listing-reading-time-sort="6" data-listing-word-count-sort="1010"> <div class="quarto-post image-right" data-index="1" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1765497600000" data-listing-file-modified-sort="1767618319847" data-listing-date-modified-sort="1767618319000" data-listing-reading-time-sort="6" data-listing-word-count-sort="1010">
<div class="thumbnail"><a href="./suivi/2025-50/2025-50.html" class="no-external"> <div class="thumbnail"><a href="./suivi/2025-50/2025-50.html" class="no-external">
<div class="listing-item-img-placeholder card-img-top" >&nbsp;</div> <div class="listing-item-img-placeholder card-img-top" >&nbsp;</div>
@ -331,7 +331,7 @@ Louis Lacoste
</a> </a>
</div> </div>
</div> </div>
<div class="quarto-post image-right" data-index="2" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1762128000000" data-listing-file-modified-sort="1766494258619" data-listing-date-modified-sort="1766494258000" data-listing-reading-time-sort="4" data-listing-word-count-sort="724"> <div class="quarto-post image-right" data-index="2" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1762128000000" data-listing-file-modified-sort="1767618319847" data-listing-date-modified-sort="1767618319000" data-listing-reading-time-sort="4" data-listing-word-count-sort="724">
<div class="thumbnail"><a href="./suivi/2025-45/2025-45.html" class="no-external"> <div class="thumbnail"><a href="./suivi/2025-45/2025-45.html" class="no-external">
<div class="listing-item-img-placeholder card-img-top" >&nbsp;</div> <div class="listing-item-img-placeholder card-img-top" >&nbsp;</div>
@ -365,7 +365,7 @@ Louis Lacoste
</a> </a>
</div> </div>
</div> </div>
<div class="quarto-post image-right" data-index="3" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1761523200000" data-listing-file-modified-sort="1766494258618" data-listing-date-modified-sort="1766494258000" data-listing-reading-time-sort="4" data-listing-word-count-sort="645"> <div class="quarto-post image-right" data-index="3" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1761523200000" data-listing-file-modified-sort="1767618319847" data-listing-date-modified-sort="1767618319000" data-listing-reading-time-sort="4" data-listing-word-count-sort="645">
<div class="thumbnail"><a href="./suivi/2025-44/2025-44.html" class="no-external"> <div class="thumbnail"><a href="./suivi/2025-44/2025-44.html" class="no-external">
<div class="listing-item-img-placeholder card-img-top" >&nbsp;</div> <div class="listing-item-img-placeholder card-img-top" >&nbsp;</div>
@ -399,7 +399,7 @@ Louis Lacoste
</a> </a>
</div> </div>
</div> </div>
<div class="quarto-post image-right" data-index="4" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1760918400000" data-listing-file-modified-sort="1766494258618" data-listing-date-modified-sort="1766494258000" data-listing-reading-time-sort="5" data-listing-word-count-sort="903"> <div class="quarto-post image-right" data-index="4" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1760918400000" data-listing-file-modified-sort="1767618319847" data-listing-date-modified-sort="1767618319000" data-listing-reading-time-sort="5" data-listing-word-count-sort="903">
<div class="thumbnail"><a href="./suivi/2025-43/2025-43.html" class="no-external"> <div class="thumbnail"><a href="./suivi/2025-43/2025-43.html" class="no-external">
<div class="listing-item-img-placeholder card-img-top" >&nbsp;</div> <div class="listing-item-img-placeholder card-img-top" >&nbsp;</div>
@ -433,7 +433,7 @@ Louis Lacoste
</a> </a>
</div> </div>
</div> </div>
<div class="quarto-post image-right" data-index="5" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1758240000000" data-listing-file-modified-sort="1766494258618" data-listing-date-modified-sort="1766494258000" data-listing-reading-time-sort="4" data-listing-word-count-sort="668"> <div class="quarto-post image-right" data-index="5" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1758240000000" data-listing-file-modified-sort="1767618319847" data-listing-date-modified-sort="1767618319000" data-listing-reading-time-sort="4" data-listing-word-count-sort="668">
<div class="thumbnail"><a href="./suivi/2025-38/2025-38.html" class="no-external"> <div class="thumbnail"><a href="./suivi/2025-38/2025-38.html" class="no-external">
<div class="listing-item-img-placeholder card-img-top" >&nbsp;</div> <div class="listing-item-img-placeholder card-img-top" >&nbsp;</div>
@ -467,7 +467,7 @@ Louis Lacoste
</a> </a>
</div> </div>
</div> </div>
<div class="quarto-post image-right" data-index="6" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1756425600000" data-listing-file-modified-sort="1766494258618" data-listing-date-modified-sort="1766494258000" data-listing-reading-time-sort="4" data-listing-word-count-sort="699"> <div class="quarto-post image-right" data-index="6" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1756425600000" data-listing-file-modified-sort="1767618319847" data-listing-date-modified-sort="1767618319000" data-listing-reading-time-sort="4" data-listing-word-count-sort="699">
<div class="thumbnail"><a href="./suivi/2025-35/2025-35.html" class="no-external"> <div class="thumbnail"><a href="./suivi/2025-35/2025-35.html" class="no-external">
<div class="listing-item-img-placeholder card-img-top" >&nbsp;</div> <div class="listing-item-img-placeholder card-img-top" >&nbsp;</div>
@ -501,7 +501,7 @@ Louis Lacoste
</a> </a>
</div> </div>
</div> </div>
<div class="quarto-post image-right" data-index="7" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1755129600000" data-listing-file-modified-sort="1766494258617" data-listing-date-modified-sort="1766494258000" data-listing-reading-time-sort="4" data-listing-word-count-sort="792"> <div class="quarto-post image-right" data-index="7" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1755129600000" data-listing-file-modified-sort="1767618319846" data-listing-date-modified-sort="1767618319000" data-listing-reading-time-sort="4" data-listing-word-count-sort="792">
<div class="thumbnail"><a href="./suivi/2025-33/2025-33.html" class="no-external"> <div class="thumbnail"><a href="./suivi/2025-33/2025-33.html" class="no-external">
<p class="card-img-top"><img src="suivi/2025-33/figs/auc-model.png" class="thumbnail-image card-img"/></p> <p class="card-img-top"><img src="suivi/2025-33/figs/auc-model.png" class="thumbnail-image card-img"/></p>
@ -536,7 +536,7 @@ Louis Lacoste
</a> </a>
</div> </div>
</div> </div>
<div class="quarto-post image-right" data-index="8" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1752537600000" data-listing-file-modified-sort="1766494258617" data-listing-date-modified-sort="1766494258000" data-listing-reading-time-sort="14" data-listing-word-count-sort="2709"> <div class="quarto-post image-right" data-index="8" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1752537600000" data-listing-file-modified-sort="1767618319846" data-listing-date-modified-sort="1767618319000" data-listing-reading-time-sort="14" data-listing-word-count-sort="2709">
<div class="thumbnail"><a href="./suivi/2025-29/2025-29.html" class="no-external"> <div class="thumbnail"><a href="./suivi/2025-29/2025-29.html" class="no-external">
<div class="listing-item-img-placeholder card-img-top" >&nbsp;</div> <div class="listing-item-img-placeholder card-img-top" >&nbsp;</div>
@ -571,7 +571,7 @@ Louis Lacoste
</a> </a>
</div> </div>
</div> </div>
<div class="quarto-post image-right" data-index="9" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1751846400000" data-listing-file-modified-sort="1766494258617" data-listing-date-modified-sort="1752192000000" data-listing-reading-time-sort="4" data-listing-word-count-sort="619"> <div class="quarto-post image-right" data-index="9" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1751846400000" data-listing-file-modified-sort="1767618319846" data-listing-date-modified-sort="1752192000000" data-listing-reading-time-sort="4" data-listing-word-count-sort="619">
<div class="thumbnail"><a href="./suivi/2025-28/2025-28.html" class="no-external"> <div class="thumbnail"><a href="./suivi/2025-28/2025-28.html" class="no-external">
<div class="listing-item-img-placeholder card-img-top" >&nbsp;</div> <div class="listing-item-img-placeholder card-img-top" >&nbsp;</div>
@ -606,7 +606,7 @@ Louis Lacoste
</a> </a>
</div> </div>
</div> </div>
<div class="quarto-post image-right" data-index="10" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1751241600000" data-listing-file-modified-sort="1766494258617" data-listing-date-modified-sort="1766494258000" data-listing-reading-time-sort="3" data-listing-word-count-sort="519"> <div class="quarto-post image-right" data-index="10" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1751241600000" data-listing-file-modified-sort="1767618319845" data-listing-date-modified-sort="1767618319000" data-listing-reading-time-sort="3" data-listing-word-count-sort="519">
<div class="thumbnail"><a href="./suivi/2025-27/2025-27.html" class="no-external"> <div class="thumbnail"><a href="./suivi/2025-27/2025-27.html" class="no-external">
<div class="listing-item-img-placeholder card-img-top" >&nbsp;</div> <div class="listing-item-img-placeholder card-img-top" >&nbsp;</div>
@ -641,7 +641,7 @@ Louis Lacoste
</a> </a>
</div> </div>
</div> </div>
<div class="quarto-post image-right" data-index="11" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1750377600000" data-listing-file-modified-sort="1766494258616" data-listing-date-modified-sort="1766494258000" data-listing-reading-time-sort="4" data-listing-word-count-sort="691"> <div class="quarto-post image-right" data-index="11" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1750377600000" data-listing-file-modified-sort="1767618319845" data-listing-date-modified-sort="1767618319000" data-listing-reading-time-sort="4" data-listing-word-count-sort="691">
<div class="thumbnail"><a href="./suivi/2025-25/2025-25.html" class="no-external"> <div class="thumbnail"><a href="./suivi/2025-25/2025-25.html" class="no-external">
<div class="listing-item-img-placeholder card-img-top" >&nbsp;</div> <div class="listing-item-img-placeholder card-img-top" >&nbsp;</div>
@ -676,7 +676,7 @@ Louis Lacoste
</a> </a>
</div> </div>
</div> </div>
<div class="quarto-post image-right" data-index="12" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1749772800000" data-listing-file-modified-sort="1766494258616" data-listing-date-modified-sort="1766494258000" data-listing-reading-time-sort="6" data-listing-word-count-sort="1009"> <div class="quarto-post image-right" data-index="12" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1749772800000" data-listing-file-modified-sort="1767618319844" data-listing-date-modified-sort="1767618319000" data-listing-reading-time-sort="6" data-listing-word-count-sort="1009">
<div class="thumbnail"><a href="./suivi/2025-24/2025-24.html" class="no-external"> <div class="thumbnail"><a href="./suivi/2025-24/2025-24.html" class="no-external">
<p class="card-img-top"><img src="suivi/2025-24/figs/ari-clustering-desc&asc9.png" alt="9 réseaux - ARI pour le clustering avec modèles iid, procédure descendante et descendante&ascendante" class="thumbnail-image card-img"/></p> <p class="card-img-top"><img src="suivi/2025-24/figs/ari-clustering-desc&asc9.png" alt="9 réseaux - ARI pour le clustering avec modèles iid, procédure descendante et descendante&ascendante" class="thumbnail-image card-img"/></p>
@ -710,7 +710,7 @@ Louis Lacoste
</a> </a>
</div> </div>
</div> </div>
<div class="quarto-post image-right" data-index="13" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1748390400000" data-listing-file-modified-sort="1766494258616" data-listing-date-modified-sort="1766494258000" data-listing-reading-time-sort="4" data-listing-word-count-sort="785"> <div class="quarto-post image-right" data-index="13" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1748390400000" data-listing-file-modified-sort="1767618319844" data-listing-date-modified-sort="1767618319000" data-listing-reading-time-sort="4" data-listing-word-count-sort="785">
<div class="thumbnail"><a href="./suivi/2025-22/2025-22.html" class="no-external"> <div class="thumbnail"><a href="./suivi/2025-22/2025-22.html" class="no-external">
<div class="listing-item-img-placeholder card-img-top" >&nbsp;</div> <div class="listing-item-img-placeholder card-img-top" >&nbsp;</div>
@ -745,7 +745,7 @@ Louis Lacoste
</a> </a>
</div> </div>
</div> </div>
<div class="quarto-post image-right" data-index="14" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1747958400000" data-listing-file-modified-sort="1766494258616" data-listing-date-modified-sort="1766494258000" data-listing-reading-time-sort="5" data-listing-word-count-sort="919"> <div class="quarto-post image-right" data-index="14" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1747958400000" data-listing-file-modified-sort="1767618319844" data-listing-date-modified-sort="1767618319000" data-listing-reading-time-sort="5" data-listing-word-count-sort="919">
<div class="thumbnail"><a href="./suivi/2025-21/2025-21.html" class="no-external"> <div class="thumbnail"><a href="./suivi/2025-21/2025-21.html" class="no-external">
<div class="listing-item-img-placeholder card-img-top" >&nbsp;</div> <div class="listing-item-img-placeholder card-img-top" >&nbsp;</div>
@ -779,7 +779,7 @@ Louis Lacoste
</a> </a>
</div> </div>
</div> </div>
<div class="quarto-post image-right" data-index="15" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1747353600000" data-listing-file-modified-sort="1766494258615" data-listing-date-modified-sort="1766494258000" data-listing-reading-time-sort="6" data-listing-word-count-sort="1030"> <div class="quarto-post image-right" data-index="15" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1747353600000" data-listing-file-modified-sort="1767618319844" data-listing-date-modified-sort="1767618319000" data-listing-reading-time-sort="6" data-listing-word-count-sort="1030">
<div class="thumbnail"><a href="./suivi/2025-20/2025-20.html" class="no-external"> <div class="thumbnail"><a href="./suivi/2025-20/2025-20.html" class="no-external">
<div class="listing-item-img-placeholder card-img-top" >&nbsp;</div> <div class="listing-item-img-placeholder card-img-top" >&nbsp;</div>
@ -813,7 +813,7 @@ Louis Lacoste
</a> </a>
</div> </div>
</div> </div>
<div class="quarto-post image-right" data-index="16" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZQ==" data-listing-date-sort="1746748800000" data-listing-file-modified-sort="1766494258615" data-listing-date-modified-sort="1766494258000" data-listing-reading-time-sort="5" data-listing-word-count-sort="814"> <div class="quarto-post image-right" data-index="16" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZQ==" data-listing-date-sort="1746748800000" data-listing-file-modified-sort="1767618319844" data-listing-date-modified-sort="1767618319000" data-listing-reading-time-sort="5" data-listing-word-count-sort="814">
<div class="thumbnail"><a href="./suivi/2025-19/2025-19.html" class="no-external"> <div class="thumbnail"><a href="./suivi/2025-19/2025-19.html" class="no-external">
<div class="listing-item-img-placeholder card-img-top" >&nbsp;</div> <div class="listing-item-img-placeholder card-img-top" >&nbsp;</div>
@ -845,7 +845,7 @@ Louis Lacoste
</a> </a>
</div> </div>
</div> </div>
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<li>⌛ Je tente avec SparseBM de JBL sur Python</li> <li>⌛ Je tente avec SparseBM de JBL sur Python</li>
<li>Faire LBM sur niveau taxonomique grossier, initialiser avec le résultat pour un niveau plus fin et ainsi de suite.</li> <li>Faire LBM sur niveau taxonomique grossier, initialiser avec le résultat pour un niveau plus fin et ainsi de suite.</li>
</ul></li> </ul></li>
<li><p>Increasing size : <img src="figs/tendance_temps.png" class="img-fluid"></p></li>
<li><p>⌛ Prendre jeu de données exemple de phyloseq :</p> <li><p>⌛ Prendre jeu de données exemple de phyloseq :</p>
<ul> <ul>
<li>✅ 😞 enterotype tourne mais pas bon résultats (semble deux blocs échantillons mais pas vu par le modèle).</li> <li>✅ 😞 enterotype tourne mais pas bon résultats (semble deux blocs échantillons mais pas vu par le modèle).</li>

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