Deploy site [CI SKIP]
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Woodpecker CI
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1352ed702b
commit
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3 changed files with 23 additions and 17 deletions
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index.html
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index.html
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@ -228,7 +228,7 @@ window.Quarto = {
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<div class="quarto-listing quarto-listing-container-default" id="listing-listing">
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<div class="list quarto-listing-default">
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<div class="quarto-post image-right" data-index="0" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1751587200000" data-listing-file-modified-sort="1751276394823" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="364">
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<div class="quarto-post image-right" data-index="0" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1751241600000" data-listing-file-modified-sort="1751293196668" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="385">
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<div class="thumbnail"><a href="./suivi/2025-27/2025-27.html" class="no-external">
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<div class="listing-item-img-placeholder card-img-top" > </div>
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@ -255,7 +255,7 @@ Pour clustering de collections sur données réelles :<br>
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<div class="metadata">
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<a href="./suivi/2025-27/2025-27.html" class="no-external">
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<div class="listing-date">
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4 juil. 2025
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30 juin 2025
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</div>
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<div class="listing-author">
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Louis Lacoste
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@ -263,7 +263,7 @@ Louis Lacoste
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</a>
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</div>
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</div>
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<div class="quarto-post image-right" data-index="1" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1750377600000" data-listing-file-modified-sort="1751276394823" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="4" data-listing-word-count-sort="699">
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<div class="quarto-post image-right" data-index="1" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1750377600000" data-listing-file-modified-sort="1751293196667" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="4" data-listing-word-count-sort="699">
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<div class="thumbnail"><a href="./suivi/2025-25/2025-25.html" class="no-external">
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<div class="listing-item-img-placeholder card-img-top" > </div>
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@ -298,7 +298,7 @@ Louis Lacoste
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</a>
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</div>
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</div>
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<div class="quarto-post image-right" data-index="2" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1749772800000" data-listing-file-modified-sort="1751276394821" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="6" data-listing-word-count-sort="1009">
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<div class="quarto-post image-right" data-index="2" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1749772800000" data-listing-file-modified-sort="1751293196666" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="6" data-listing-word-count-sort="1009">
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<div class="thumbnail"><a href="./suivi/2025-24/2025-24.html" class="no-external">
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<p class="card-img-top"><img src="suivi/2025-24/figs/ari-clustering-desc&asc9.png" class="thumbnail-image card-img"/></p>
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@ -332,7 +332,7 @@ Louis Lacoste
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</a>
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</div>
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</div>
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<div class="quarto-post image-right" data-index="3" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1748390400000" data-listing-file-modified-sort="1751276394821" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="4" data-listing-word-count-sort="785">
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<div class="quarto-post image-right" data-index="3" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1748390400000" data-listing-file-modified-sort="1751293196666" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="4" data-listing-word-count-sort="785">
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<div class="thumbnail"><a href="./suivi/2025-22/2025-22.html" class="no-external">
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<div class="listing-item-img-placeholder card-img-top" > </div>
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@ -367,7 +367,7 @@ Louis Lacoste
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</a>
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</div>
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</div>
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<div class="quarto-post image-right" data-index="4" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1747958400000" data-listing-file-modified-sort="1751276394820" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="5" data-listing-word-count-sort="919">
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<div class="quarto-post image-right" data-index="4" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1747958400000" data-listing-file-modified-sort="1751293196666" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="5" data-listing-word-count-sort="919">
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<div class="thumbnail"><a href="./suivi/2025-21/2025-21.html" class="no-external">
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<div class="listing-item-img-placeholder card-img-top" > </div>
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@ -401,7 +401,7 @@ Louis Lacoste
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</a>
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</div>
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</div>
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<div class="quarto-post image-right" data-index="5" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1747353600000" data-listing-file-modified-sort="1751276394820" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="6" data-listing-word-count-sort="1030">
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<div class="quarto-post image-right" data-index="5" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZSUyQ0dOTg==" data-listing-date-sort="1747353600000" data-listing-file-modified-sort="1751293196666" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="6" data-listing-word-count-sort="1030">
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<div class="thumbnail"><a href="./suivi/2025-20/2025-20.html" class="no-external">
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<div class="listing-item-img-placeholder card-img-top" > </div>
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@ -435,7 +435,7 @@ Louis Lacoste
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</a>
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</div>
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</div>
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<div class="quarto-post image-right" data-index="6" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZQ==" data-listing-date-sort="1746748800000" data-listing-file-modified-sort="1751276394820" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="5" data-listing-word-count-sort="814">
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<div class="quarto-post image-right" data-index="6" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZQ==" data-listing-date-sort="1746748800000" data-listing-file-modified-sort="1751293196666" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="5" data-listing-word-count-sort="814">
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<div class="thumbnail"><a href="./suivi/2025-19/2025-19.html" class="no-external">
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<div class="listing-item-img-placeholder card-img-top" > </div>
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@ -467,7 +467,7 @@ Louis Lacoste
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</a>
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</div>
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</div>
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<div class="quarto-post image-right" data-index="7" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZQ==" data-listing-date-sort="1746144000000" data-listing-file-modified-sort="1751276394818" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="3" data-listing-word-count-sort="521">
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<div class="quarto-post image-right" data-index="7" data-categories="Y29sQmlTQk0lMkNpbmYlQzMlQTlyZW5jZQ==" data-listing-date-sort="1746144000000" data-listing-file-modified-sort="1751293196665" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="3" data-listing-word-count-sort="521">
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<div class="thumbnail"><a href="./suivi/2025-18/2025-18.html" class="no-external">
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<p class="card-img-top"><img src="suivi/2025-18/figs/density-subdore.png" class="thumbnail-image card-img"/></p>
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@ -499,7 +499,7 @@ Louis Lacoste
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</a>
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</div>
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</div>
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<div class="quarto-post image-right" data-index="8" data-categories="Y29sQmlTQk0=" data-listing-date-sort="1745539200000" data-listing-file-modified-sort="1751276394794" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="4" data-listing-word-count-sort="714">
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<div class="quarto-post image-right" data-index="8" data-categories="Y29sQmlTQk0=" data-listing-date-sort="1745539200000" data-listing-file-modified-sort="1751293196654" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="4" data-listing-word-count-sort="714">
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<div class="thumbnail"><a href="./suivi/2025-17/2025-17.html" class="no-external">
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<p class="card-img-top"><img src="suivi/2025-17/figs/density-subdore.png" class="thumbnail-image card-img"/></p>
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@ -529,7 +529,7 @@ Louis Lacoste
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</a>
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</div>
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</div>
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<div class="quarto-post image-right" data-index="9" data-categories="Y29sQmlTQk0=" data-listing-date-sort="1744934400000" data-listing-file-modified-sort="1751276394789" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="352">
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<div class="quarto-post image-right" data-index="9" data-categories="Y29sQmlTQk0=" data-listing-date-sort="1744934400000" data-listing-file-modified-sort="1751293196652" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="352">
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<div class="thumbnail"><a href="./suivi/2025-16/2025-16.html" class="no-external">
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<div class="listing-item-img-placeholder card-img-top" > </div>
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@ -559,7 +559,7 @@ Louis Lacoste
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</a>
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</div>
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</div>
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<div class="quarto-post image-right" data-index="10" data-categories="Y29sQmlTQk0=" data-listing-date-sort="1743724800000" data-listing-file-modified-sort="1751276394784" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="353">
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<div class="quarto-post image-right" data-index="10" data-categories="Y29sQmlTQk0=" data-listing-date-sort="1743724800000" data-listing-file-modified-sort="1751293196650" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="353">
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<div class="thumbnail"><a href="./suivi/2025-15/2025-15.html" class="no-external">
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<p class="card-img-top"><img src="suivi/2025-15/figs/alluvial-clusterings.png" class="thumbnail-image card-img"/></p>
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@ -589,7 +589,7 @@ Louis Lacoste
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</a>
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</div>
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</div>
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<div class="quarto-post image-right" data-index="11" data-categories="Y29sQmlTQk0=" data-listing-date-sort="1743120000000" data-listing-file-modified-sort="1751276394784" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="3" data-listing-word-count-sort="413">
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<div class="quarto-post image-right" data-index="11" data-categories="Y29sQmlTQk0=" data-listing-date-sort="1743120000000" data-listing-file-modified-sort="1751293196650" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="3" data-listing-word-count-sort="413">
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<div class="thumbnail"><a href="./suivi/2025-14/2025-14.html" class="no-external">
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<div class="listing-item-img-placeholder card-img-top" > </div>
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@ -619,7 +619,7 @@ Louis Lacoste
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</a>
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</div>
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</div>
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<div class="quarto-post image-right" data-index="12" data-categories="Y29sQmlTQk0=" data-listing-date-sort="1742169600000" data-listing-file-modified-sort="1751276394774" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="3" data-listing-word-count-sort="426">
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<div class="quarto-post image-right" data-index="12" data-categories="Y29sQmlTQk0=" data-listing-date-sort="1742169600000" data-listing-file-modified-sort="1751293196643" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="3" data-listing-word-count-sort="426">
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<div class="thumbnail"><a href="./suivi/2025-13/2025-13.html" class="no-external">
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<p class="card-img-top"><img src="suivi/2025-13/figs/baldock_meso_iid.png" class="thumbnail-image card-img"/></p>
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@ -263,7 +263,7 @@
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"href": "index.html",
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"title": "Journal suivi de la thèse",
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"section": "",
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"text": "Bilan semaine 27 2025 : 30 juin - 4 juillet\n\n\n\ncolBiSBM\n\ninférence\n\nGNN\n\n\n\n\n\n\n\n\n\n4 juil. 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 25 2025 : 16 juin - 20 juin\n\n\n\ncolBiSBM\n\ninférence\n\nGNN\n\n\n\n\n\n\n\n\n\n20 juin 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 24 2025 : 10 juin - 13 juin\n\n\n\ncolBiSBM\n\ninférence\n\nGNN\n\n\n\n\n\n\n\n\n\n13 juin 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 22 2025 : 26 mai - 30 mai\n\n\n\ncolBiSBM\n\ninférence\n\nGNN\n\n\n\n\n\n\n\n\n\n28 mai 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 21 2025 : 26 mai - 30 mai\n\n\n\ncolBiSBM\n\ninférence\n\nGNN\n\n\n\n\n\n\n\n\n\n23 mai 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 20 2025 : 12 mai - 16 mai\n\n\n\ncolBiSBM\n\ninférence\n\nGNN\n\n\n\n\n\n\n\n\n\n16 mai 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 19 2025 : 5 mai - 9 mai\n\n\n\ncolBiSBM\n\ninférence\n\n\n\n\n\n\n\n\n\n9 mai 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 18 2025 : 28 avril - 2 mai\n\n\n\ncolBiSBM\n\ninférence\n\n\n\n\n\n\n\n\n\n2 mai 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 17 2025 : 24 avril - 25 avril\n\n\n\ncolBiSBM\n\n\n\n\n\n\n\n\n\n25 avr. 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 16 2025\n\n\n\ncolBiSBM\n\n\n\n\n\n\n\n\n\n18 avr. 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 15 2025 : 31 mars-4 avril\n\n\n\ncolBiSBM\n\n\n\n\n\n\n\n\n\n4 avr. 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 14 2025 : 24-28 mars\n\n\n\ncolBiSBM\n\n\n\n\n\n\n\n\n\n28 mars 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 13 2025 : 17-21 mars\n\n\n\ncolBiSBM\n\n\n\n\n\n\n\n\n\n17 mars 2025\n\n\nLouis Lacoste\n\n\n\n\n\nAucun article correspondant"
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"text": "Bilan semaine 27 2025 : 30 juin - 4 juillet\n\n\n\ncolBiSBM\n\ninférence\n\nGNN\n\n\n\n\n\n\n\n\n\n30 juin 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 25 2025 : 16 juin - 20 juin\n\n\n\ncolBiSBM\n\ninférence\n\nGNN\n\n\n\n\n\n\n\n\n\n20 juin 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 24 2025 : 10 juin - 13 juin\n\n\n\ncolBiSBM\n\ninférence\n\nGNN\n\n\n\n\n\n\n\n\n\n13 juin 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 22 2025 : 26 mai - 30 mai\n\n\n\ncolBiSBM\n\ninférence\n\nGNN\n\n\n\n\n\n\n\n\n\n28 mai 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 21 2025 : 26 mai - 30 mai\n\n\n\ncolBiSBM\n\ninférence\n\nGNN\n\n\n\n\n\n\n\n\n\n23 mai 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 20 2025 : 12 mai - 16 mai\n\n\n\ncolBiSBM\n\ninférence\n\nGNN\n\n\n\n\n\n\n\n\n\n16 mai 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 19 2025 : 5 mai - 9 mai\n\n\n\ncolBiSBM\n\ninférence\n\n\n\n\n\n\n\n\n\n9 mai 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 18 2025 : 28 avril - 2 mai\n\n\n\ncolBiSBM\n\ninférence\n\n\n\n\n\n\n\n\n\n2 mai 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 17 2025 : 24 avril - 25 avril\n\n\n\ncolBiSBM\n\n\n\n\n\n\n\n\n\n25 avr. 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 16 2025\n\n\n\ncolBiSBM\n\n\n\n\n\n\n\n\n\n18 avr. 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 15 2025 : 31 mars-4 avril\n\n\n\ncolBiSBM\n\n\n\n\n\n\n\n\n\n4 avr. 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 14 2025 : 24-28 mars\n\n\n\ncolBiSBM\n\n\n\n\n\n\n\n\n\n28 mars 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 13 2025 : 17-21 mars\n\n\n\ncolBiSBM\n\n\n\n\n\n\n\n\n\n17 mars 2025\n\n\nLouis Lacoste\n\n\n\n\n\nAucun article correspondant"
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},
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{
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"objectID": "suivi/2025-13/2025-13.html",
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@ -347,7 +347,7 @@
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"href": "suivi/2025-27/2025-27.html#lecture-en-cours",
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"title": "Bilan semaine 27 2025 : 30 juin - 4 juillet",
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"section": "Lecture en cours",
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"text": "Lecture en cours\n\nOT\n\n⌛ Mazelet, Flamary, et Thirion (s. d.) Intéressant pour le transport optimal entre graphes de tailles différentes\n⌛ Nenna (s. d.b) Pour comprendre le problème d’OT régularisé pour l’entropie.\n⌛ Nenna (s. d.a)\n\n\n\nInférence de graphes"
|
||||
"text": "Lecture en cours\n\nOT\n\n⌛ Mazelet, Flamary, et Thirion (s. d.) Intéressant pour le transport optimal entre graphes de tailles différentes\n⌛ Nenna (s. d.b) Pour comprendre le problème d’OT régularisé pour l’entropie.\n⌛ Nenna (s. d.a)\n\n\n\nInférence de graphes\n\n✅ Morton et al. (2021) VAE with Multinomial Logistic Normal distribution using Isometric Log Ratio tranform Plus rapide que les autres méthodes et performances équivalentes"
|
||||
},
|
||||
{
|
||||
"objectID": "suivi/2025-27/2025-27.html#a-discuter",
|
||||
|
|
|
|||
|
|
@ -196,7 +196,7 @@ window.Quarto = {
|
|||
<div>
|
||||
<div class="quarto-title-meta-heading">Date de publication</div>
|
||||
<div class="quarto-title-meta-contents">
|
||||
<p class="date">4 juillet 2025</p>
|
||||
<p class="date">30 juin 2025</p>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
|
|
@ -295,6 +295,9 @@ Z^0_i \overset{?}{=} & Z^1_i \overset{?}{=} Z^2_i \overset{?}{=} Z^3_i &
|
|||
</section>
|
||||
<section id="inférence-de-graphes" class="level3">
|
||||
<h3 class="anchored" data-anchor-id="inférence-de-graphes">Inférence de graphes</h3>
|
||||
<ul>
|
||||
<li>✅ <span class="citation" data-cites="Morton2021.11.09.467939">Morton et al. (<a href="#ref-Morton2021.11.09.467939" role="doc-biblioref">2021</a>)</span> VAE with Multinomial Logistic Normal distribution using Isometric Log Ratio tranform Plus rapide que les autres méthodes et performances équivalentes</li>
|
||||
</ul>
|
||||
</section>
|
||||
</section>
|
||||
<section id="a-discuter" class="level2">
|
||||
|
|
@ -320,6 +323,9 @@ Z^0_i \overset{?}{=} & Z^1_i \overset{?}{=} Z^2_i \overset{?}{=} Z^3_i &
|
|||
<div id="ref-mazeletUnsupervisedLearningOptimal" class="csl-entry" role="listitem">
|
||||
Mazelet, Sonia, Rémi Flamary, et Bertrand Thirion. s. d. <span>« Unsupervised <span>Learning</span> for <span>Optimal Transport</span> Plan Prediction Between Unbalanced Graphs »</span>.
|
||||
</div>
|
||||
<div id="ref-Morton2021.11.09.467939" class="csl-entry" role="listitem">
|
||||
Morton, James T., Justin Silverman, Gleb Tikhonov, Harri Lähdesmäki, et Rich Bonneau. 2021. <span>« Scalable Estimation of Microbial Co-Occurrence Networks with <span>Variational Autoencoders</span> »</span>. <em>bioRxiv : the preprint server for biology</em>. <a href="https://doi.org/10.1101/2021.11.09.467939">https://doi.org/10.1101/2021.11.09.467939</a>.
|
||||
</div>
|
||||
<div id="ref-nennaLecture1Monge" class="csl-entry" role="listitem">
|
||||
Nenna, Luca. s. d.a. <span>« Lecture 1 <span>Monge</span> and <span>Kantorovich</span> Problems: From Primal to Dual »</span>.
|
||||
</div>
|
||||
|
|
|
|||
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Reference in a new issue