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"section": "",
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"text": "Relire intro St Clair\nS’inspirer structure pour mon intro\nTrouver biblio intro\nRédiger l’intro\nLire les papiers de Baldock Traveset Souza Cordeniz Trojelsgaard et Gibson\nCorriger structure de simus :\n\nPour noisy \\alpha :\n\nLogit pour envoyer la gaussienne vers (0,1)\nBeta contrainte dans (0,1)\n\nPour noisy links : Générer nb_clustering collections de taille M puis prélever \\epsilon_{max}n_r n_c liens à inverser puis pour les \\epsilon < \\epsilon_{max} prélever dans la liste des indices afin d’avoir des perturbations emboitées.\n\nIdée Sophie: Regarder clustering de données plantes-pollinisateur selon gradient d’urbanisation\nIdée Pierre : Regarder la contribution au BICL de la collection des réseaux et comparer au sep BICL pour essayer de repérer les outliers."
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"title": "Bilan semaine 16 2025",
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"section": "",
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"text": "Relire intro St Clair\nS’inspirer structure pour mon intro\nTrouver biblio intro\nRédiger l’intro\nLire les papiers de Baldock Traveset Souza Cordeniz Trojelsgaard et Gibson\nCorriger structure de simus :\n\nPour noisy \\alpha :\n\nLogit pour envoyer la gaussienne vers (0,1)\nBeta contrainte dans (0,1)\n\nPour noisy links : Générer nb_clustering collections de taille M puis prélever \\epsilon_{max}n_r n_c liens à inverser puis pour les \\epsilon < \\epsilon_{max} prélever dans la liste des indices afin d’avoir des perturbations emboitées.\n\nIdée Sophie: Regarder clustering de données plantes-pollinisateur selon gradient d’urbanisation\nIdée Pierre : Regarder la contribution au BICL de la collection des réseaux et comparer au sep BICL pour essayer de repérer les outliers."
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"title": "Bilan semaine 16 2025",
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"section": "J’ai fait",
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"text": "J’ai fait\n\nJ’ai lancé le clustering iid ascendant sur données sub-Doré. Résultats stables mais 27 collections formées donc pas de mise en commun des structures…\nRédiger et modifier les cadres de simulations dans le papier pour qu’ils soient raccord avec les données obtenues.\nÉtoffer la partie simulations studies en mettant plusieurs points pour présenter les simus et les résultats succintement.\n\n\nje pense qu’il faudrait étoffer en mettrant plusieurs points répartis en paragraphe. genre vérif selection de modèle verif clustering réseau, verif transfer leraning et de dire les résultats en qq mots\n\n\nComment faire pour l’inscription JdS (paiement, coldem …) : voir avec Christelle\nCSI : St Clair, Sonia ou Elisa et Pierre Gérard"
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"objectID": "suivi/2025-16/2025-16.html#a-continuer",
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"title": "Bilan semaine 16 2025",
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||||||
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"section": "A continuer",
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"text": "A continuer\n\nRésultats simus NA Erreur pour certaines conditions : Pour NA robustness générer nb_rep collections de taille M=2 et prélever \\epsilon_{max}n_r n_c liens à retirer puis pour les \\epsilon < \\epsilon_{max} prélever dans la liste des indices afin d’avoir des perturbations emboitées. Il faut que j’ajoute un mécanisme pour reprendre des conditions qui ont plantés et que je skip dans le future_lapply les conditions déjà traitées (pour avoir la même seed quand je vais exécuter le code). Implémenté les missing steps en attente des résultats MIGALE.\nLire Biological Networks - François Képès\nJ’ai esquissé des bouts d’intro"
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"title": "Bilan semaine 15 2025 : 31 mars-4 avril",
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"section": "",
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"text": "Relire intro St Clair\nS’inspirer structure pour mon intro\nTrouver biblio intro\nRédiger l’intro\nLire les papiers de Baldock Traveset Souza Cordeniz Trojelsgaard et Gibson\nCorriger structure de simus :\n\nPour noisy \\alpha :\n\nLogit pour envoyer la gaussienne vers (0,1)\nBeta contrainte dans (0,1)\n\nPour noisy links : Générer nb_clustering collections de taille M puis prélever \\epsilon_{max}n_r n_c liens à inverser puis pour les \\epsilon < \\epsilon_{max} prélever dans la liste des indices afin d’avoir des perturbations emboitées.\n\nExtraire les nombres de liens communs et déplacer le tableau en annexes en faisant juste un paragraphe dans le corps de texte.\n\nPour VENDREDI\n\nRédiger et modifier les cadres de simulations dans le papier pour qu’ils soient raccord avec les données obtenues.\nÉtoffer la partie simulations studies en mettant plusieurs points pour présenter les simus et les résultats succintement.\n\n\nje pense qu’il faudrait étoffer en mettrant plusieurs points répartis en paragraphe. genre vérif selection de modèle verif clustering réseau, verif transfer leraning et de dire les résultats en qq mots\n\n\nIdée Sophie: Regarder clustering de données plantes-pollinisateur selon gradient d’urbanisation"
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"title": "Bilan semaine 15 2025 : 31 mars-4 avril",
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"section": "",
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"text": "Relire intro St Clair\nS’inspirer structure pour mon intro\nTrouver biblio intro\nRédiger l’intro\nLire les papiers de Baldock Traveset Souza Cordeniz Trojelsgaard et Gibson\nCorriger structure de simus :\n\nPour noisy \\alpha :\n\nLogit pour envoyer la gaussienne vers (0,1)\nBeta contrainte dans (0,1)\n\nPour noisy links : Générer nb_clustering collections de taille M puis prélever \\epsilon_{max}n_r n_c liens à inverser puis pour les \\epsilon < \\epsilon_{max} prélever dans la liste des indices afin d’avoir des perturbations emboitées.\n\nExtraire les nombres de liens communs et déplacer le tableau en annexes en faisant juste un paragraphe dans le corps de texte.\n\nPour VENDREDI\n\nRédiger et modifier les cadres de simulations dans le papier pour qu’ils soient raccord avec les données obtenues.\nÉtoffer la partie simulations studies en mettant plusieurs points pour présenter les simus et les résultats succintement.\n\n\nje pense qu’il faudrait étoffer en mettrant plusieurs points répartis en paragraphe. genre vérif selection de modèle verif clustering réseau, verif transfer leraning et de dire les résultats en qq mots\n\n\nIdée Sophie: Regarder clustering de données plantes-pollinisateur selon gradient d’urbanisation"
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"title": "Bilan semaine 15 2025 : 31 mars-4 avril",
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"section": "J’ai fait",
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"text": "J’ai fait\n\nClustering sub-doré pas de stabilité à la répétition malheureusement \nVérifier si les Baldock anglais ont des espèces en communs “Do they involve common species?”. Oui environ 70/250 soit plus de 20%.\nPrésenter le réseau Afrique du Sud dès l’intro des réseaux anglais de Baldock"
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||||||
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"title": "Bilan semaine 15 2025 : 31 mars-4 avril",
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||||||
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"section": "A continuer",
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"text": "A continuer\n\nRésultats simus NA Erreur pour certaines conditions : Pour NA robustness générer nb_rep collections de taille M=2 et prélever \\epsilon_{max}n_r n_c liens à retirer puis pour les \\epsilon < \\epsilon_{max} prélever dans la liste des indices afin d’avoir des perturbations emboitées. Il faut que j’ajoute un mécanisme pour reprendre des conditions qui ont plantés et que je skip dans le future_lapply les conditions déjà traitées (pour avoir la même seed quand je vais exécuter le code). Implémenté les missing steps en attente des résultats MIGALE.\nJ’ai lancé le clustering iid ascendant sur données sub-Doré. en attente des résultats MIGALE"
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"title": "Bilan semaine 13 2025 : 17-21 mars",
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"section": "",
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"text": "Cette semaine j’ai :\n\nFini d’intégrer à colSBM tous les changements (clustering dérecursifier pour uni et bipartites& cli …) et contacter Saint-Clair pour passer colSBM sous GrossSBM.\nRelancer et obtenus les résultats pour le clustering sur les réseaux Baldock\n\n\n\n\nBaldock iid\n\n\n\n\n\nBaldock pi\n\n\n\n\n\nBaldock rho\n\n\n\n\n\nBaldock pirho\n\n\n\nRelancer et obtenus les résultats pour les simus ajoutant du bruits sur les structures et liens\n\nPour noisy \\alpha:\n\nPlan de simulation 2 collections (d\\in (1,2)) avec M = 30 soit 15 réseaux par type. n_r = n_c = 120 et \\pi_1 = \\begin{pmatrix} 0.5, 0.3, 0.2\\end{pmatrix},~\n \\rho_1 = \\begin{pmatrix}0.4, 0.3, 0.2, 0.1\\end{pmatrix},~\n \\alpha_1 = \\begin{pmatrix}\n 0.85& 0.4& 0.2& 0.15\\\\\n 0.6& 0.2& 0.15& 0.15\\\\\n 0.2& 0.15& 0.15& 0.7\n \\end{pmatrix}\n \\pi_2 = (0.5, 0.3, 0.2),~\n \\rho_2 = (0.45, 0.3, 0.25),~\n \\alpha_2 = \\begin{pmatrix}\n 0.65& 0.15& 0.15\\\\\n 0.15& 0.8& 0.15\\\\\n 0.15& 0.15& 0.4\n \\end{pmatrix}\n\\epsilon \\in (0, 0.01, \\dots 0.05) qui est l’écart-type d’une \\mathcal{N}_{Q_1^d \\times Q_2^d}(0,\\epsilon^2) = vec(N^m), \\forall m \\in (1,\\dots, M). Et \\forall m, X^m \\sim LBM_{n_r,n_c}(Q_1^d, Q_2^d, \\alpha_d + N^m, \\pi_d, \\rho_d)\nRésultats : \n\nPour noisy links:\n\nPlan de simu M = 30, n_r = n_c = 120. \\pi_1 = \\begin{pmatrix} 0.5, 0.3, 0.2\\end{pmatrix},~\n \\rho_1 = \\begin{pmatrix}0.4, 0.3, 0.2, 0.1\\end{pmatrix},~\n \\alpha_1 = \\begin{pmatrix}\n 0.85& 0.4& 0.2& 0.05\\\\\n 0.6& 0.2& 0.05& 0.05\\\\\n 0.2& 0.05& 0.05& 0.7\n \\end{pmatrix}\n \\pi_2 = (0.5, 0.3, 0.2),~\n \\rho_2 = (0.45, 0.3, 0.25),~\n \\alpha_2 = \\begin{pmatrix}\n 0.65& 0.05& 0.05\\\\\n 0.05& 0.8& 0.05\\\\\n 0.05& 0.05& 0.4\n \\end{pmatrix}\n\\epsilon \\in (0, 0.05, \\dots 0.5), indices de la matrice = sample.int(n_r \\times n_c, size = n_r \\times n_c \\times \\epsilon). Les indices tirés inverse la valeur du lien (1 -> 0, 0 -> 1)\n\n\n\n\n\n\n\n\n\nClear links\n\n\n\n\n\n\n\nNoisy links\n\n\n\n\n\n\nFigure 1\n\n\n\n\nRelancer simulations robustesse aux NAs\nChanger les plots résultats NAs pour faire sous-plots comparant sep vs model."
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"title": "Journal suivi de la thèse",
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"text": "Bilan semaine 17 2025 : 24 avril - 25 avril\n\n\n\ncolBiSBM\n\n\n\n\n\n\n\n\n\n25 avr. 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 16 2025\n\n\n\ncolBiSBM\n\n\n\n\n\n\n\n\n\n18 avr. 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 15 2025 : 31 mars-4 avril\n\n\n\ncolBiSBM\n\n\n\n\n\n\n\n\n\n4 avr. 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 14 2025 : 24-28 mars\n\n\n\ncolBiSBM\n\n\n\n\n\n\n\n\n\n28 mars 2025\n\n\nLouis Lacoste\n\n\n\n\n\n\n\n\n\n\n\n\nBilan semaine 13 2025 : 17-21 mars\n\n\n\ncolBiSBM\n\n\n\n\n\n\n\n\n\n17 mars 2025\n\n\nLouis Lacoste\n\n\n\n\n\nAucun article correspondant"
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"title": "Bilan semaine 17 2025 : 24 avril - 25 avril",
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"section": "",
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"text": "Relire intro St Clair\nS’inspirer structure pour mon intro\nTrouver biblio intro\nRédiger l’intro\nRegarder les applications pour les collections de réseaux recommender system\nLire les papiers de Baldock Traveset Souza Cordeniz Trojelsgaard et Gibson\nDire résultats nettement meilleurs et variabilités inférieures.\n\n\n\n\n\nRelancer simus clustering avec VEM steps = 10 000 et plus nombreux init pour spectral\nAjouter simu clustering métriques nb sous-collections obtenues. Vérifier les résultats obtenus si ARI = 0. Et augmenter la taille M = 30 avec M_1 = M_2 = M_3 = 10.\nComparer sur clustering unipartite avec versions symétriser des par blocs des matrices d’adjacences.\nCorriger structure de simus :\n\nPour noisy \\alpha :\n\nLogit pour envoyer la gaussienne vers (0,1)\nBeta contrainte dans (0,1)\n\nPour noisy links : Générer nb_clustering collections de taille M puis prélever \\epsilon_{max}n_r n_c liens à inverser puis pour les \\epsilon < \\epsilon_{max} prélever dans la liste des indices afin d’avoir des perturbations emboitées.\n\n\n\n\n\n\nKmeans sur la densité des réseaux subdoré pour pré-partitionner et clusteriser.\n\n\n\n\n\nCréer des vignettes illustrant par exemple des cas de simulations. Possible de mettre l’exemple d’application de Sophie sur les réseaux avec gradient d’urbanisation."
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"title": "Bilan semaine 17 2025 : 24 avril - 25 avril",
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"section": "",
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"text": "Relire intro St Clair\nS’inspirer structure pour mon intro\nTrouver biblio intro\nRédiger l’intro\nRegarder les applications pour les collections de réseaux recommender system\nLire les papiers de Baldock Traveset Souza Cordeniz Trojelsgaard et Gibson\nDire résultats nettement meilleurs et variabilités inférieures.\n\n\n\n\n\nRelancer simus clustering avec VEM steps = 10 000 et plus nombreux init pour spectral\nAjouter simu clustering métriques nb sous-collections obtenues. Vérifier les résultats obtenus si ARI = 0. Et augmenter la taille M = 30 avec M_1 = M_2 = M_3 = 10.\nComparer sur clustering unipartite avec versions symétriser des par blocs des matrices d’adjacences.\nCorriger structure de simus :\n\nPour noisy \\alpha :\n\nLogit pour envoyer la gaussienne vers (0,1)\nBeta contrainte dans (0,1)\n\nPour noisy links : Générer nb_clustering collections de taille M puis prélever \\epsilon_{max}n_r n_c liens à inverser puis pour les \\epsilon < \\epsilon_{max} prélever dans la liste des indices afin d’avoir des perturbations emboitées.\n\n\n\n\n\n\nKmeans sur la densité des réseaux subdoré pour pré-partitionner et clusteriser.\n\n\n\n\n\nCréer des vignettes illustrant par exemple des cas de simulations. Possible de mettre l’exemple d’application de Sophie sur les réseaux avec gradient d’urbanisation."
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"title": "Bilan semaine 17 2025 : 24 avril - 25 avril",
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"section": "J’ai fait",
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"text": "J’ai fait\n\nCréer un README descriptif du dépôt des codes pour l’article.\nRemonter figure sélection de modèle dans le corps de l’article\nEnrichir légende de la figure 7 et 8\nSupprimer p_NA des autres cadrans des proportions de NA\nBasculer le code du clustering pour utiliser hclust et mis l’argument method de hclust avec single par défaut\nAjouter pipeline qui knit README.Rmd à chaque merge dans main colSBM"
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"title": "Bilan semaine 17 2025 : 24 avril - 25 avril",
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"section": "A continuer",
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"text": "A continuer\n\nRésultats simus NA Erreur pour certaines conditions : Pour NA robustness générer nb_rep collections de taille M=2 et prélever \\epsilon_{max}n_r n_c liens à retirer puis pour les \\epsilon < \\epsilon_{max} prélever dans la liste des indices afin d’avoir des perturbations emboitées. Il faut que j’ajoute un mécanisme pour reprendre des conditions qui ont plantés et que je skip dans le future_lapply les conditions déjà traitées (pour avoir la même seed quand je vais exécuter le code). Implémenté les missing steps en attente des résultats MIGALE.\nLire Biological Networks - François Képès\nJ’ai esquissé des bouts d’intro\nRelancer simus d’inférence avec n = 240 pour voir si la qualité augmenter (se rassurer). En fait on est déjà à 240, j’ai relancé avec M = 4 au lieu de M = 2. En attente résultats MIGALE\n\n\nCorrection méthodo\n\nIdée Pierre : Regarder la contribution au BICL de la collection des réseaux et comparer au sep BICL pour essayer de repérer les outliers. En regardant la vbound (pas la pénalité) de chaque réseau dans le joint vs sa vbound dans le sep -> Résultats : pas de différences majeures entre les réseaux avec le rapport vbound_joint/vbound_sep, les outliers ne sont pas marqués.\nRegarder si plutôt que k médioid possible meilleurs résultats avec d’autres distances hclust avec min, max etc… -> L’algo PAM donne des clusters équilibrés sans séparer les outliers Je regarde avec plutôt des hclust avec métrique single pour séparer les outliers.\nVoir si in fine possible de repérer des outliers à partir de ces nouvelles métriques\nRegarder la répartition de densité dans les réseaux sub-doré -> déséquilibrée\n\n\nEn faisant des clusterings par densité on constate qu'avec un modèle iid pour des réseaux dont la densité est entre :\n- 0 et 0.05 : Baldock et Souza tout le monde se retrouvait ensemble avec *Partitioning around medoids*\n\n\nApplications\n\nIdée Sophie: Regarder clustering de données plantes-pollinisateur selon gradient d’urbanisation\n\n\nSophie a fait une appli qui marche bien et va dans le sens de l’analyse faite (à savoir pas d’effet du gradien d’urbanisation). À continuer pour l’intégrer dans l’article !\n\n\n\nLancer clustering auteur par auteur du sub-Doré : 5 collections différentes dans l’idée.\nUne fois fait, Sophie ne trouve pas que ce soit le plus pertinent pour illustrer le clustering. Plus intéressant de garder le clustering de données simulées (M = 30) et se servir des exemples dessous et des parcours exhaustif des possibilités de partitionnement comme comparatif.\n\nBaldock\n\n\n\nAlluvial Baldock\n\n\n\n\nGibson\n\n\n\nAlluvial Gibson\n\n\n\n\nSouza\n\n\n\nAlluvial Souza\n\n\n\n\nTraveset\n\n\n\nAlluvial Traveset\n\n\n\n\nTrojelsgaard\n\n\n\nAlluvial Trojelgaard"
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"title": "Bilan semaine 14 2025 : 24-28 mars",
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||||||
|
"text": "Relire intro St Clair\nS’inspirer structure pour mon intro\nTrouver biblio intro\nRédiger l’intro\nAgrandir la collection d’application, pas seulement Baldock mais aussi Trojelsgaard par ex\nLire les papiers de Baldock Traveset Souza Cordeniz Trojelsgaard et Gibson\nPrésenter le réseau Afrique du Sud dès l’intro des réseaux anglais de Baldock\nCorriger structure de simus :\n\nPour noisy \\alpha :\n\nLogit pour envoyer la gaussienne vers (0,1)\nBeta contrainte dans (0,1)\n\nPour noisy links : Générer nb_clustering collections de taille M puis prélever \\epsilon_{max}n_r n_c liens à inverser puis pour les \\epsilon < \\epsilon_{max} prélever dans la liste des indices afin d’avoir des perturbations emboitées.\n\nRédiger et modifier les cadres de simulations dans le papier pour qu’ils soient raccord avec les données obtenues.\nLancer clustering iid ascendant sur données sub-Doré.\nVérifier si les Baldock anglais ont des espèces en communs “Do they involve common species?”."
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"objectID": "suivi/2025-14/2025-14.html#a-faire",
|
||||||
|
"href": "suivi/2025-14/2025-14.html#a-faire",
|
||||||
|
"title": "Bilan semaine 14 2025 : 24-28 mars",
|
||||||
|
"section": "",
|
||||||
|
"text": "Relire intro St Clair\nS’inspirer structure pour mon intro\nTrouver biblio intro\nRédiger l’intro\nAgrandir la collection d’application, pas seulement Baldock mais aussi Trojelsgaard par ex\nLire les papiers de Baldock Traveset Souza Cordeniz Trojelsgaard et Gibson\nPrésenter le réseau Afrique du Sud dès l’intro des réseaux anglais de Baldock\nCorriger structure de simus :\n\nPour noisy \\alpha :\n\nLogit pour envoyer la gaussienne vers (0,1)\nBeta contrainte dans (0,1)\n\nPour noisy links : Générer nb_clustering collections de taille M puis prélever \\epsilon_{max}n_r n_c liens à inverser puis pour les \\epsilon < \\epsilon_{max} prélever dans la liste des indices afin d’avoir des perturbations emboitées.\n\nRédiger et modifier les cadres de simulations dans le papier pour qu’ils soient raccord avec les données obtenues.\nLancer clustering iid ascendant sur données sub-Doré.\nVérifier si les Baldock anglais ont des espèces en communs “Do they involve common species?”."
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"objectID": "suivi/2025-14/2025-14.html#jai-fait",
|
||||||
|
"href": "suivi/2025-14/2025-14.html#jai-fait",
|
||||||
|
"title": "Bilan semaine 14 2025 : 24-28 mars",
|
||||||
|
"section": "J’ai fait",
|
||||||
|
"text": "J’ai fait\n\nCorriger structure de simus :\n\nPour NA robustness\n\nDéfinir dans la section 3 :\n\n\nRemark that for iid-colBiSBM, \\pi_q, \\rho_r > 0, and thus the blocks exist and are represented in all networks. For the other models, some blocks may not exist in some networks and this is why \\pi_q^m, \\rho_r^m \\geq 0. Using S^{(1)} and S^{(2)} we can define the restricted parameters for each network and we denote them as \\widetilde{\\bm{\\pi}}^m, \\widetilde{\\bm{\\rho}}^m and \\widetilde{\\bm{\\alpha}}^m. The restrictions thus indicate the blocks that are represented in the network m.\n\n\nÉcrire la partie preuve pour identif \\pi-colBiSBM et \\rho-colBiSBM. Identif : \\pi et \\rho en attente retours Pierre et Sophie\nSaint-Clair va passer colSBM sous GrossSBM\nAgrandir la collection d’application, pas seulement Baldock mais aussi Trojelsgaard par ex : Collection agrandie avec Baldock Traveset Souza Cordeniz Trojelsgaard et Gibson, en attente MIGALE. Clustering instable"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"objectID": "suivi/2025-14/2025-14.html#a-continuer",
|
||||||
|
"href": "suivi/2025-14/2025-14.html#a-continuer",
|
||||||
|
"title": "Bilan semaine 14 2025 : 24-28 mars",
|
||||||
|
"section": "A continuer",
|
||||||
|
"text": "A continuer\n\nRésultats simus NA Erreur pour certaines conditions : Pour NA robustness générer nb_rep collections de taille M=2 et prélever \\epsilon_{max}n_r n_c liens à retirer puis pour les \\epsilon < \\epsilon_{max} prélever dans la liste des indices afin d’avoir des perturbations emboitées. Il faut que j’ajoute un mécanisme pour reprendre des conditions qui ont plantés et que je skip dans le future_lapply les conditions déjà traitées (pour avoir la même seed quand je vais exécuter le code). Implémenté les missing steps en attente des résultats MIGALE.\nPour sub doré en attente MIGALE augmenter le nbre de répèt de la procédure."
|
||||||
|
}
|
||||||
|
]
|
||||||
12
site_libs/bootstrap/bootstrap-b7709e3ceabf99e2647fc5ea1b9a158c.min.css
vendored
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12
site_libs/bootstrap/bootstrap-b7709e3ceabf99e2647fc5ea1b9a158c.min.css
vendored
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vendored
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2078
site_libs/bootstrap/bootstrap-icons.css
vendored
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site_libs/bootstrap/bootstrap-icons.woff
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site_libs/bootstrap/bootstrap-icons.woff
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7
site_libs/bootstrap/bootstrap.min.js
vendored
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7
site_libs/bootstrap/bootstrap.min.js
vendored
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7
site_libs/clipboard/clipboard.min.js
vendored
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7
site_libs/clipboard/clipboard.min.js
vendored
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9
site_libs/quarto-html/anchor.min.js
vendored
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9
site_libs/quarto-html/anchor.min.js
vendored
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6
site_libs/quarto-html/popper.min.js
vendored
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6
site_libs/quarto-html/popper.min.js
vendored
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|
|
@ -0,0 +1,205 @@
|
||||||
|
/* quarto syntax highlight colors */
|
||||||
|
:root {
|
||||||
|
--quarto-hl-ot-color: #003B4F;
|
||||||
|
--quarto-hl-at-color: #657422;
|
||||||
|
--quarto-hl-ss-color: #20794D;
|
||||||
|
--quarto-hl-an-color: #5E5E5E;
|
||||||
|
--quarto-hl-fu-color: #4758AB;
|
||||||
|
--quarto-hl-st-color: #20794D;
|
||||||
|
--quarto-hl-cf-color: #003B4F;
|
||||||
|
--quarto-hl-op-color: #5E5E5E;
|
||||||
|
--quarto-hl-er-color: #AD0000;
|
||||||
|
--quarto-hl-bn-color: #AD0000;
|
||||||
|
--quarto-hl-al-color: #AD0000;
|
||||||
|
--quarto-hl-va-color: #111111;
|
||||||
|
--quarto-hl-bu-color: inherit;
|
||||||
|
--quarto-hl-ex-color: inherit;
|
||||||
|
--quarto-hl-pp-color: #AD0000;
|
||||||
|
--quarto-hl-in-color: #5E5E5E;
|
||||||
|
--quarto-hl-vs-color: #20794D;
|
||||||
|
--quarto-hl-wa-color: #5E5E5E;
|
||||||
|
--quarto-hl-do-color: #5E5E5E;
|
||||||
|
--quarto-hl-im-color: #00769E;
|
||||||
|
--quarto-hl-ch-color: #20794D;
|
||||||
|
--quarto-hl-dt-color: #AD0000;
|
||||||
|
--quarto-hl-fl-color: #AD0000;
|
||||||
|
--quarto-hl-co-color: #5E5E5E;
|
||||||
|
--quarto-hl-cv-color: #5E5E5E;
|
||||||
|
--quarto-hl-cn-color: #8f5902;
|
||||||
|
--quarto-hl-sc-color: #5E5E5E;
|
||||||
|
--quarto-hl-dv-color: #AD0000;
|
||||||
|
--quarto-hl-kw-color: #003B4F;
|
||||||
|
}
|
||||||
|
|
||||||
|
/* other quarto variables */
|
||||||
|
:root {
|
||||||
|
--quarto-font-monospace: SFMono-Regular, Menlo, Monaco, Consolas, "Liberation Mono", "Courier New", monospace;
|
||||||
|
}
|
||||||
|
|
||||||
|
pre > code.sourceCode > span {
|
||||||
|
color: #003B4F;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span {
|
||||||
|
color: #003B4F;
|
||||||
|
}
|
||||||
|
|
||||||
|
code.sourceCode > span {
|
||||||
|
color: #003B4F;
|
||||||
|
}
|
||||||
|
|
||||||
|
div.sourceCode,
|
||||||
|
div.sourceCode pre.sourceCode {
|
||||||
|
color: #003B4F;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.ot {
|
||||||
|
color: #003B4F;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.at {
|
||||||
|
color: #657422;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.ss {
|
||||||
|
color: #20794D;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.an {
|
||||||
|
color: #5E5E5E;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.fu {
|
||||||
|
color: #4758AB;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.st {
|
||||||
|
color: #20794D;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.cf {
|
||||||
|
color: #003B4F;
|
||||||
|
font-weight: bold;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.op {
|
||||||
|
color: #5E5E5E;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.er {
|
||||||
|
color: #AD0000;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.bn {
|
||||||
|
color: #AD0000;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.al {
|
||||||
|
color: #AD0000;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.va {
|
||||||
|
color: #111111;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.bu {
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.ex {
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.pp {
|
||||||
|
color: #AD0000;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.in {
|
||||||
|
color: #5E5E5E;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.vs {
|
||||||
|
color: #20794D;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.wa {
|
||||||
|
color: #5E5E5E;
|
||||||
|
font-style: italic;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.do {
|
||||||
|
color: #5E5E5E;
|
||||||
|
font-style: italic;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.im {
|
||||||
|
color: #00769E;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.ch {
|
||||||
|
color: #20794D;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.dt {
|
||||||
|
color: #AD0000;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.fl {
|
||||||
|
color: #AD0000;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.co {
|
||||||
|
color: #5E5E5E;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.cv {
|
||||||
|
color: #5E5E5E;
|
||||||
|
font-style: italic;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.cn {
|
||||||
|
color: #8f5902;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.sc {
|
||||||
|
color: #5E5E5E;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.dv {
|
||||||
|
color: #AD0000;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
code span.kw {
|
||||||
|
color: #003B4F;
|
||||||
|
font-weight: bold;
|
||||||
|
font-style: inherit;
|
||||||
|
}
|
||||||
|
|
||||||
|
.prevent-inlining {
|
||||||
|
content: "</";
|
||||||
|
}
|
||||||
|
|
||||||
|
/*# sourceMappingURL=f3b3742851fc2edd117c78e6756ce3a0.css.map */
|
||||||
845
site_libs/quarto-html/quarto.js
Normal file
845
site_libs/quarto-html/quarto.js
Normal file
|
|
@ -0,0 +1,845 @@
|
||||||
|
import * as tabsets from "./tabsets/tabsets.js";
|
||||||
|
|
||||||
|
const sectionChanged = new CustomEvent("quarto-sectionChanged", {
|
||||||
|
detail: {},
|
||||||
|
bubbles: true,
|
||||||
|
cancelable: false,
|
||||||
|
composed: false,
|
||||||
|
});
|
||||||
|
|
||||||
|
const layoutMarginEls = () => {
|
||||||
|
// Find any conflicting margin elements and add margins to the
|
||||||
|
// top to prevent overlap
|
||||||
|
const marginChildren = window.document.querySelectorAll(
|
||||||
|
".column-margin.column-container > *, .margin-caption, .aside"
|
||||||
|
);
|
||||||
|
|
||||||
|
let lastBottom = 0;
|
||||||
|
for (const marginChild of marginChildren) {
|
||||||
|
if (marginChild.offsetParent !== null) {
|
||||||
|
// clear the top margin so we recompute it
|
||||||
|
marginChild.style.marginTop = null;
|
||||||
|
const top = marginChild.getBoundingClientRect().top + window.scrollY;
|
||||||
|
if (top < lastBottom) {
|
||||||
|
const marginChildStyle = window.getComputedStyle(marginChild);
|
||||||
|
const marginBottom = parseFloat(marginChildStyle["marginBottom"]);
|
||||||
|
const margin = lastBottom - top + marginBottom;
|
||||||
|
marginChild.style.marginTop = `${margin}px`;
|
||||||
|
}
|
||||||
|
const styles = window.getComputedStyle(marginChild);
|
||||||
|
const marginTop = parseFloat(styles["marginTop"]);
|
||||||
|
lastBottom = top + marginChild.getBoundingClientRect().height + marginTop;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
};
|
||||||
|
|
||||||
|
window.document.addEventListener("DOMContentLoaded", function (_event) {
|
||||||
|
// Recompute the position of margin elements anytime the body size changes
|
||||||
|
if (window.ResizeObserver) {
|
||||||
|
const resizeObserver = new window.ResizeObserver(
|
||||||
|
throttle(() => {
|
||||||
|
layoutMarginEls();
|
||||||
|
if (
|
||||||
|
window.document.body.getBoundingClientRect().width < 990 &&
|
||||||
|
isReaderMode()
|
||||||
|
) {
|
||||||
|
quartoToggleReader();
|
||||||
|
}
|
||||||
|
}, 50)
|
||||||
|
);
|
||||||
|
resizeObserver.observe(window.document.body);
|
||||||
|
}
|
||||||
|
|
||||||
|
const tocEl = window.document.querySelector('nav.toc-active[role="doc-toc"]');
|
||||||
|
const sidebarEl = window.document.getElementById("quarto-sidebar");
|
||||||
|
const leftTocEl = window.document.getElementById("quarto-sidebar-toc-left");
|
||||||
|
const marginSidebarEl = window.document.getElementById(
|
||||||
|
"quarto-margin-sidebar"
|
||||||
|
);
|
||||||
|
// function to determine whether the element has a previous sibling that is active
|
||||||
|
const prevSiblingIsActiveLink = (el) => {
|
||||||
|
const sibling = el.previousElementSibling;
|
||||||
|
if (sibling && sibling.tagName === "A") {
|
||||||
|
return sibling.classList.contains("active");
|
||||||
|
} else {
|
||||||
|
return false;
|
||||||
|
}
|
||||||
|
};
|
||||||
|
|
||||||
|
// dispatch for htmlwidgets
|
||||||
|
// they use slideenter event to trigger resize
|
||||||
|
function fireSlideEnter() {
|
||||||
|
const event = window.document.createEvent("Event");
|
||||||
|
event.initEvent("slideenter", true, true);
|
||||||
|
window.document.dispatchEvent(event);
|
||||||
|
}
|
||||||
|
|
||||||
|
const tabs = window.document.querySelectorAll('a[data-bs-toggle="tab"]');
|
||||||
|
tabs.forEach((tab) => {
|
||||||
|
tab.addEventListener("shown.bs.tab", fireSlideEnter);
|
||||||
|
});
|
||||||
|
|
||||||
|
// dispatch for shiny
|
||||||
|
// they use BS shown and hidden events to trigger rendering
|
||||||
|
function distpatchShinyEvents(previous, current) {
|
||||||
|
if (window.jQuery) {
|
||||||
|
if (previous) {
|
||||||
|
window.jQuery(previous).trigger("hidden");
|
||||||
|
}
|
||||||
|
if (current) {
|
||||||
|
window.jQuery(current).trigger("shown");
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
// tabby.js listener: Trigger event for htmlwidget and shiny
|
||||||
|
document.addEventListener(
|
||||||
|
"tabby",
|
||||||
|
function (event) {
|
||||||
|
fireSlideEnter();
|
||||||
|
distpatchShinyEvents(event.detail.previousTab, event.detail.tab);
|
||||||
|
},
|
||||||
|
false
|
||||||
|
);
|
||||||
|
|
||||||
|
// Track scrolling and mark TOC links as active
|
||||||
|
// get table of contents and sidebar (bail if we don't have at least one)
|
||||||
|
const tocLinks = tocEl
|
||||||
|
? [...tocEl.querySelectorAll("a[data-scroll-target]")]
|
||||||
|
: [];
|
||||||
|
const makeActive = (link) => tocLinks[link].classList.add("active");
|
||||||
|
const removeActive = (link) => tocLinks[link].classList.remove("active");
|
||||||
|
const removeAllActive = () =>
|
||||||
|
[...Array(tocLinks.length).keys()].forEach((link) => removeActive(link));
|
||||||
|
|
||||||
|
// activate the anchor for a section associated with this TOC entry
|
||||||
|
tocLinks.forEach((link) => {
|
||||||
|
link.addEventListener("click", () => {
|
||||||
|
if (link.href.indexOf("#") !== -1) {
|
||||||
|
const anchor = link.href.split("#")[1];
|
||||||
|
const heading = window.document.querySelector(
|
||||||
|
`[data-anchor-id="${anchor}"]`
|
||||||
|
);
|
||||||
|
if (heading) {
|
||||||
|
// Add the class
|
||||||
|
heading.classList.add("reveal-anchorjs-link");
|
||||||
|
|
||||||
|
// function to show the anchor
|
||||||
|
const handleMouseout = () => {
|
||||||
|
heading.classList.remove("reveal-anchorjs-link");
|
||||||
|
heading.removeEventListener("mouseout", handleMouseout);
|
||||||
|
};
|
||||||
|
|
||||||
|
// add a function to clear the anchor when the user mouses out of it
|
||||||
|
heading.addEventListener("mouseout", handleMouseout);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
});
|
||||||
|
});
|
||||||
|
|
||||||
|
const sections = tocLinks.map((link) => {
|
||||||
|
const target = link.getAttribute("data-scroll-target");
|
||||||
|
if (target.startsWith("#")) {
|
||||||
|
return window.document.getElementById(decodeURI(`${target.slice(1)}`));
|
||||||
|
} else {
|
||||||
|
return window.document.querySelector(decodeURI(`${target}`));
|
||||||
|
}
|
||||||
|
});
|
||||||
|
|
||||||
|
const sectionMargin = 200;
|
||||||
|
let currentActive = 0;
|
||||||
|
// track whether we've initialized state the first time
|
||||||
|
let init = false;
|
||||||
|
|
||||||
|
const updateActiveLink = () => {
|
||||||
|
// The index from bottom to top (e.g. reversed list)
|
||||||
|
let sectionIndex = -1;
|
||||||
|
if (
|
||||||
|
window.innerHeight + window.pageYOffset >=
|
||||||
|
window.document.body.offsetHeight
|
||||||
|
) {
|
||||||
|
// This is the no-scroll case where last section should be the active one
|
||||||
|
sectionIndex = 0;
|
||||||
|
} else {
|
||||||
|
// This finds the last section visible on screen that should be made active
|
||||||
|
sectionIndex = [...sections].reverse().findIndex((section) => {
|
||||||
|
if (section) {
|
||||||
|
return window.pageYOffset >= section.offsetTop - sectionMargin;
|
||||||
|
} else {
|
||||||
|
return false;
|
||||||
|
}
|
||||||
|
});
|
||||||
|
}
|
||||||
|
if (sectionIndex > -1) {
|
||||||
|
const current = sections.length - sectionIndex - 1;
|
||||||
|
if (current !== currentActive) {
|
||||||
|
removeAllActive();
|
||||||
|
currentActive = current;
|
||||||
|
makeActive(current);
|
||||||
|
if (init) {
|
||||||
|
window.dispatchEvent(sectionChanged);
|
||||||
|
}
|
||||||
|
init = true;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
};
|
||||||
|
|
||||||
|
const inHiddenRegion = (top, bottom, hiddenRegions) => {
|
||||||
|
for (const region of hiddenRegions) {
|
||||||
|
if (top <= region.bottom && bottom >= region.top) {
|
||||||
|
return true;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
return false;
|
||||||
|
};
|
||||||
|
|
||||||
|
const categorySelector = "header.quarto-title-block .quarto-category";
|
||||||
|
const activateCategories = (href) => {
|
||||||
|
// Find any categories
|
||||||
|
// Surround them with a link pointing back to:
|
||||||
|
// #category=Authoring
|
||||||
|
try {
|
||||||
|
const categoryEls = window.document.querySelectorAll(categorySelector);
|
||||||
|
for (const categoryEl of categoryEls) {
|
||||||
|
const categoryText = categoryEl.textContent;
|
||||||
|
if (categoryText) {
|
||||||
|
const link = `${href}#category=${encodeURIComponent(categoryText)}`;
|
||||||
|
const linkEl = window.document.createElement("a");
|
||||||
|
linkEl.setAttribute("href", link);
|
||||||
|
for (const child of categoryEl.childNodes) {
|
||||||
|
linkEl.append(child);
|
||||||
|
}
|
||||||
|
categoryEl.appendChild(linkEl);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
} catch {
|
||||||
|
// Ignore errors
|
||||||
|
}
|
||||||
|
};
|
||||||
|
function hasTitleCategories() {
|
||||||
|
return window.document.querySelector(categorySelector) !== null;
|
||||||
|
}
|
||||||
|
|
||||||
|
function offsetRelativeUrl(url) {
|
||||||
|
const offset = getMeta("quarto:offset");
|
||||||
|
return offset ? offset + url : url;
|
||||||
|
}
|
||||||
|
|
||||||
|
function offsetAbsoluteUrl(url) {
|
||||||
|
const offset = getMeta("quarto:offset");
|
||||||
|
const baseUrl = new URL(offset, window.location);
|
||||||
|
|
||||||
|
const projRelativeUrl = url.replace(baseUrl, "");
|
||||||
|
if (projRelativeUrl.startsWith("/")) {
|
||||||
|
return projRelativeUrl;
|
||||||
|
} else {
|
||||||
|
return "/" + projRelativeUrl;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
// read a meta tag value
|
||||||
|
function getMeta(metaName) {
|
||||||
|
const metas = window.document.getElementsByTagName("meta");
|
||||||
|
for (let i = 0; i < metas.length; i++) {
|
||||||
|
if (metas[i].getAttribute("name") === metaName) {
|
||||||
|
return metas[i].getAttribute("content");
|
||||||
|
}
|
||||||
|
}
|
||||||
|
return "";
|
||||||
|
}
|
||||||
|
|
||||||
|
async function findAndActivateCategories() {
|
||||||
|
// Categories search with listing only use path without query
|
||||||
|
const currentPagePath = offsetAbsoluteUrl(
|
||||||
|
window.location.origin + window.location.pathname
|
||||||
|
);
|
||||||
|
const response = await fetch(offsetRelativeUrl("listings.json"));
|
||||||
|
if (response.status == 200) {
|
||||||
|
return response.json().then(function (listingPaths) {
|
||||||
|
const listingHrefs = [];
|
||||||
|
for (const listingPath of listingPaths) {
|
||||||
|
const pathWithoutLeadingSlash = listingPath.listing.substring(1);
|
||||||
|
for (const item of listingPath.items) {
|
||||||
|
const encodedItem = encodeURI(item);
|
||||||
|
if (
|
||||||
|
encodedItem === currentPagePath ||
|
||||||
|
encodedItem === currentPagePath + "index.html"
|
||||||
|
) {
|
||||||
|
// Resolve this path against the offset to be sure
|
||||||
|
// we already are using the correct path to the listing
|
||||||
|
// (this adjusts the listing urls to be rooted against
|
||||||
|
// whatever root the page is actually running against)
|
||||||
|
const relative = offsetRelativeUrl(pathWithoutLeadingSlash);
|
||||||
|
const baseUrl = window.location;
|
||||||
|
const resolvedPath = new URL(relative, baseUrl);
|
||||||
|
listingHrefs.push(resolvedPath.pathname);
|
||||||
|
break;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
// Look up the tree for a nearby linting and use that if we find one
|
||||||
|
const nearestListing = findNearestParentListing(
|
||||||
|
offsetAbsoluteUrl(window.location.pathname),
|
||||||
|
listingHrefs
|
||||||
|
);
|
||||||
|
if (nearestListing) {
|
||||||
|
activateCategories(nearestListing);
|
||||||
|
} else {
|
||||||
|
// See if the referrer is a listing page for this item
|
||||||
|
const referredRelativePath = offsetAbsoluteUrl(document.referrer);
|
||||||
|
const referrerListing = listingHrefs.find((listingHref) => {
|
||||||
|
const isListingReferrer =
|
||||||
|
listingHref === referredRelativePath ||
|
||||||
|
listingHref === referredRelativePath + "index.html";
|
||||||
|
return isListingReferrer;
|
||||||
|
});
|
||||||
|
|
||||||
|
if (referrerListing) {
|
||||||
|
// Try to use the referrer if possible
|
||||||
|
activateCategories(referrerListing);
|
||||||
|
} else if (listingHrefs.length > 0) {
|
||||||
|
// Otherwise, just fall back to the first listing
|
||||||
|
activateCategories(listingHrefs[0]);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
});
|
||||||
|
}
|
||||||
|
}
|
||||||
|
if (hasTitleCategories()) {
|
||||||
|
findAndActivateCategories();
|
||||||
|
}
|
||||||
|
|
||||||
|
const findNearestParentListing = (href, listingHrefs) => {
|
||||||
|
if (!href || !listingHrefs) {
|
||||||
|
return undefined;
|
||||||
|
}
|
||||||
|
// Look up the tree for a nearby linting and use that if we find one
|
||||||
|
const relativeParts = href.substring(1).split("/");
|
||||||
|
while (relativeParts.length > 0) {
|
||||||
|
const path = relativeParts.join("/");
|
||||||
|
for (const listingHref of listingHrefs) {
|
||||||
|
if (listingHref.startsWith(path)) {
|
||||||
|
return listingHref;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
relativeParts.pop();
|
||||||
|
}
|
||||||
|
|
||||||
|
return undefined;
|
||||||
|
};
|
||||||
|
|
||||||
|
const manageSidebarVisiblity = (el, placeholderDescriptor) => {
|
||||||
|
let isVisible = true;
|
||||||
|
let elRect;
|
||||||
|
|
||||||
|
return (hiddenRegions) => {
|
||||||
|
if (el === null) {
|
||||||
|
return;
|
||||||
|
}
|
||||||
|
|
||||||
|
// Find the last element of the TOC
|
||||||
|
const lastChildEl = el.lastElementChild;
|
||||||
|
|
||||||
|
if (lastChildEl) {
|
||||||
|
// Converts the sidebar to a menu
|
||||||
|
const convertToMenu = () => {
|
||||||
|
for (const child of el.children) {
|
||||||
|
child.style.opacity = 0;
|
||||||
|
child.style.overflow = "hidden";
|
||||||
|
child.style.pointerEvents = "none";
|
||||||
|
}
|
||||||
|
|
||||||
|
nexttick(() => {
|
||||||
|
const toggleContainer = window.document.createElement("div");
|
||||||
|
toggleContainer.style.width = "100%";
|
||||||
|
toggleContainer.classList.add("zindex-over-content");
|
||||||
|
toggleContainer.classList.add("quarto-sidebar-toggle");
|
||||||
|
toggleContainer.classList.add("headroom-target"); // Marks this to be managed by headeroom
|
||||||
|
toggleContainer.id = placeholderDescriptor.id;
|
||||||
|
toggleContainer.style.position = "fixed";
|
||||||
|
|
||||||
|
const toggleIcon = window.document.createElement("i");
|
||||||
|
toggleIcon.classList.add("quarto-sidebar-toggle-icon");
|
||||||
|
toggleIcon.classList.add("bi");
|
||||||
|
toggleIcon.classList.add("bi-caret-down-fill");
|
||||||
|
|
||||||
|
const toggleTitle = window.document.createElement("div");
|
||||||
|
const titleEl = window.document.body.querySelector(
|
||||||
|
placeholderDescriptor.titleSelector
|
||||||
|
);
|
||||||
|
if (titleEl) {
|
||||||
|
toggleTitle.append(
|
||||||
|
titleEl.textContent || titleEl.innerText,
|
||||||
|
toggleIcon
|
||||||
|
);
|
||||||
|
}
|
||||||
|
toggleTitle.classList.add("zindex-over-content");
|
||||||
|
toggleTitle.classList.add("quarto-sidebar-toggle-title");
|
||||||
|
toggleContainer.append(toggleTitle);
|
||||||
|
|
||||||
|
const toggleContents = window.document.createElement("div");
|
||||||
|
toggleContents.classList = el.classList;
|
||||||
|
toggleContents.classList.add("zindex-over-content");
|
||||||
|
toggleContents.classList.add("quarto-sidebar-toggle-contents");
|
||||||
|
for (const child of el.children) {
|
||||||
|
if (child.id === "toc-title") {
|
||||||
|
continue;
|
||||||
|
}
|
||||||
|
|
||||||
|
const clone = child.cloneNode(true);
|
||||||
|
clone.style.opacity = 1;
|
||||||
|
clone.style.pointerEvents = null;
|
||||||
|
clone.style.display = null;
|
||||||
|
toggleContents.append(clone);
|
||||||
|
}
|
||||||
|
toggleContents.style.height = "0px";
|
||||||
|
const positionToggle = () => {
|
||||||
|
// position the element (top left of parent, same width as parent)
|
||||||
|
if (!elRect) {
|
||||||
|
elRect = el.getBoundingClientRect();
|
||||||
|
}
|
||||||
|
toggleContainer.style.left = `${elRect.left}px`;
|
||||||
|
toggleContainer.style.top = `${elRect.top}px`;
|
||||||
|
toggleContainer.style.width = `${elRect.width}px`;
|
||||||
|
};
|
||||||
|
positionToggle();
|
||||||
|
|
||||||
|
toggleContainer.append(toggleContents);
|
||||||
|
el.parentElement.prepend(toggleContainer);
|
||||||
|
|
||||||
|
// Process clicks
|
||||||
|
let tocShowing = false;
|
||||||
|
// Allow the caller to control whether this is dismissed
|
||||||
|
// when it is clicked (e.g. sidebar navigation supports
|
||||||
|
// opening and closing the nav tree, so don't dismiss on click)
|
||||||
|
const clickEl = placeholderDescriptor.dismissOnClick
|
||||||
|
? toggleContainer
|
||||||
|
: toggleTitle;
|
||||||
|
|
||||||
|
const closeToggle = () => {
|
||||||
|
if (tocShowing) {
|
||||||
|
toggleContainer.classList.remove("expanded");
|
||||||
|
toggleContents.style.height = "0px";
|
||||||
|
tocShowing = false;
|
||||||
|
}
|
||||||
|
};
|
||||||
|
|
||||||
|
// Get rid of any expanded toggle if the user scrolls
|
||||||
|
window.document.addEventListener(
|
||||||
|
"scroll",
|
||||||
|
throttle(() => {
|
||||||
|
closeToggle();
|
||||||
|
}, 50)
|
||||||
|
);
|
||||||
|
|
||||||
|
// Handle positioning of the toggle
|
||||||
|
window.addEventListener(
|
||||||
|
"resize",
|
||||||
|
throttle(() => {
|
||||||
|
elRect = undefined;
|
||||||
|
positionToggle();
|
||||||
|
}, 50)
|
||||||
|
);
|
||||||
|
|
||||||
|
window.addEventListener("quarto-hrChanged", () => {
|
||||||
|
elRect = undefined;
|
||||||
|
});
|
||||||
|
|
||||||
|
// Process the click
|
||||||
|
clickEl.onclick = () => {
|
||||||
|
if (!tocShowing) {
|
||||||
|
toggleContainer.classList.add("expanded");
|
||||||
|
toggleContents.style.height = null;
|
||||||
|
tocShowing = true;
|
||||||
|
} else {
|
||||||
|
closeToggle();
|
||||||
|
}
|
||||||
|
};
|
||||||
|
});
|
||||||
|
};
|
||||||
|
|
||||||
|
// Converts a sidebar from a menu back to a sidebar
|
||||||
|
const convertToSidebar = () => {
|
||||||
|
for (const child of el.children) {
|
||||||
|
child.style.opacity = 1;
|
||||||
|
child.style.overflow = null;
|
||||||
|
child.style.pointerEvents = null;
|
||||||
|
}
|
||||||
|
|
||||||
|
const placeholderEl = window.document.getElementById(
|
||||||
|
placeholderDescriptor.id
|
||||||
|
);
|
||||||
|
if (placeholderEl) {
|
||||||
|
placeholderEl.remove();
|
||||||
|
}
|
||||||
|
|
||||||
|
el.classList.remove("rollup");
|
||||||
|
};
|
||||||
|
|
||||||
|
if (isReaderMode()) {
|
||||||
|
convertToMenu();
|
||||||
|
isVisible = false;
|
||||||
|
} else {
|
||||||
|
// Find the top and bottom o the element that is being managed
|
||||||
|
const elTop = el.offsetTop;
|
||||||
|
const elBottom =
|
||||||
|
elTop + lastChildEl.offsetTop + lastChildEl.offsetHeight;
|
||||||
|
|
||||||
|
if (!isVisible) {
|
||||||
|
// If the element is current not visible reveal if there are
|
||||||
|
// no conflicts with overlay regions
|
||||||
|
if (!inHiddenRegion(elTop, elBottom, hiddenRegions)) {
|
||||||
|
convertToSidebar();
|
||||||
|
isVisible = true;
|
||||||
|
}
|
||||||
|
} else {
|
||||||
|
// If the element is visible, hide it if it conflicts with overlay regions
|
||||||
|
// and insert a placeholder toggle (or if we're in reader mode)
|
||||||
|
if (inHiddenRegion(elTop, elBottom, hiddenRegions)) {
|
||||||
|
convertToMenu();
|
||||||
|
isVisible = false;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
};
|
||||||
|
};
|
||||||
|
|
||||||
|
const tabEls = document.querySelectorAll('a[data-bs-toggle="tab"]');
|
||||||
|
for (const tabEl of tabEls) {
|
||||||
|
const id = tabEl.getAttribute("data-bs-target");
|
||||||
|
if (id) {
|
||||||
|
const columnEl = document.querySelector(
|
||||||
|
`${id} .column-margin, .tabset-margin-content`
|
||||||
|
);
|
||||||
|
if (columnEl)
|
||||||
|
tabEl.addEventListener("shown.bs.tab", function (event) {
|
||||||
|
const el = event.srcElement;
|
||||||
|
if (el) {
|
||||||
|
const visibleCls = `${el.id}-margin-content`;
|
||||||
|
// walk up until we find a parent tabset
|
||||||
|
let panelTabsetEl = el.parentElement;
|
||||||
|
while (panelTabsetEl) {
|
||||||
|
if (panelTabsetEl.classList.contains("panel-tabset")) {
|
||||||
|
break;
|
||||||
|
}
|
||||||
|
panelTabsetEl = panelTabsetEl.parentElement;
|
||||||
|
}
|
||||||
|
|
||||||
|
if (panelTabsetEl) {
|
||||||
|
const prevSib = panelTabsetEl.previousElementSibling;
|
||||||
|
if (
|
||||||
|
prevSib &&
|
||||||
|
prevSib.classList.contains("tabset-margin-container")
|
||||||
|
) {
|
||||||
|
const childNodes = prevSib.querySelectorAll(
|
||||||
|
".tabset-margin-content"
|
||||||
|
);
|
||||||
|
for (const childEl of childNodes) {
|
||||||
|
if (childEl.classList.contains(visibleCls)) {
|
||||||
|
childEl.classList.remove("collapse");
|
||||||
|
} else {
|
||||||
|
childEl.classList.add("collapse");
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
layoutMarginEls();
|
||||||
|
});
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
// Manage the visibility of the toc and the sidebar
|
||||||
|
const marginScrollVisibility = manageSidebarVisiblity(marginSidebarEl, {
|
||||||
|
id: "quarto-toc-toggle",
|
||||||
|
titleSelector: "#toc-title",
|
||||||
|
dismissOnClick: true,
|
||||||
|
});
|
||||||
|
const sidebarScrollVisiblity = manageSidebarVisiblity(sidebarEl, {
|
||||||
|
id: "quarto-sidebarnav-toggle",
|
||||||
|
titleSelector: ".title",
|
||||||
|
dismissOnClick: false,
|
||||||
|
});
|
||||||
|
let tocLeftScrollVisibility;
|
||||||
|
if (leftTocEl) {
|
||||||
|
tocLeftScrollVisibility = manageSidebarVisiblity(leftTocEl, {
|
||||||
|
id: "quarto-lefttoc-toggle",
|
||||||
|
titleSelector: "#toc-title",
|
||||||
|
dismissOnClick: true,
|
||||||
|
});
|
||||||
|
}
|
||||||
|
|
||||||
|
// Find the first element that uses formatting in special columns
|
||||||
|
const conflictingEls = window.document.body.querySelectorAll(
|
||||||
|
'[class^="column-"], [class*=" column-"], aside, [class*="margin-caption"], [class*=" margin-caption"], [class*="margin-ref"], [class*=" margin-ref"]'
|
||||||
|
);
|
||||||
|
|
||||||
|
// Filter all the possibly conflicting elements into ones
|
||||||
|
// the do conflict on the left or ride side
|
||||||
|
const arrConflictingEls = Array.from(conflictingEls);
|
||||||
|
const leftSideConflictEls = arrConflictingEls.filter((el) => {
|
||||||
|
if (el.tagName === "ASIDE") {
|
||||||
|
return false;
|
||||||
|
}
|
||||||
|
return Array.from(el.classList).find((className) => {
|
||||||
|
return (
|
||||||
|
className !== "column-body" &&
|
||||||
|
className.startsWith("column-") &&
|
||||||
|
!className.endsWith("right") &&
|
||||||
|
!className.endsWith("container") &&
|
||||||
|
className !== "column-margin"
|
||||||
|
);
|
||||||
|
});
|
||||||
|
});
|
||||||
|
const rightSideConflictEls = arrConflictingEls.filter((el) => {
|
||||||
|
if (el.tagName === "ASIDE") {
|
||||||
|
return true;
|
||||||
|
}
|
||||||
|
|
||||||
|
const hasMarginCaption = Array.from(el.classList).find((className) => {
|
||||||
|
return className == "margin-caption";
|
||||||
|
});
|
||||||
|
if (hasMarginCaption) {
|
||||||
|
return true;
|
||||||
|
}
|
||||||
|
|
||||||
|
return Array.from(el.classList).find((className) => {
|
||||||
|
return (
|
||||||
|
className !== "column-body" &&
|
||||||
|
!className.endsWith("container") &&
|
||||||
|
className.startsWith("column-") &&
|
||||||
|
!className.endsWith("left")
|
||||||
|
);
|
||||||
|
});
|
||||||
|
});
|
||||||
|
|
||||||
|
const kOverlapPaddingSize = 10;
|
||||||
|
function toRegions(els) {
|
||||||
|
return els.map((el) => {
|
||||||
|
const boundRect = el.getBoundingClientRect();
|
||||||
|
const top =
|
||||||
|
boundRect.top +
|
||||||
|
document.documentElement.scrollTop -
|
||||||
|
kOverlapPaddingSize;
|
||||||
|
return {
|
||||||
|
top,
|
||||||
|
bottom: top + el.scrollHeight + 2 * kOverlapPaddingSize,
|
||||||
|
};
|
||||||
|
});
|
||||||
|
}
|
||||||
|
|
||||||
|
let hasObserved = false;
|
||||||
|
const visibleItemObserver = (els) => {
|
||||||
|
let visibleElements = [...els];
|
||||||
|
const intersectionObserver = new IntersectionObserver(
|
||||||
|
(entries, _observer) => {
|
||||||
|
entries.forEach((entry) => {
|
||||||
|
if (entry.isIntersecting) {
|
||||||
|
if (visibleElements.indexOf(entry.target) === -1) {
|
||||||
|
visibleElements.push(entry.target);
|
||||||
|
}
|
||||||
|
} else {
|
||||||
|
visibleElements = visibleElements.filter((visibleEntry) => {
|
||||||
|
return visibleEntry !== entry;
|
||||||
|
});
|
||||||
|
}
|
||||||
|
});
|
||||||
|
|
||||||
|
if (!hasObserved) {
|
||||||
|
hideOverlappedSidebars();
|
||||||
|
}
|
||||||
|
hasObserved = true;
|
||||||
|
},
|
||||||
|
{}
|
||||||
|
);
|
||||||
|
els.forEach((el) => {
|
||||||
|
intersectionObserver.observe(el);
|
||||||
|
});
|
||||||
|
|
||||||
|
return {
|
||||||
|
getVisibleEntries: () => {
|
||||||
|
return visibleElements;
|
||||||
|
},
|
||||||
|
};
|
||||||
|
};
|
||||||
|
|
||||||
|
const rightElementObserver = visibleItemObserver(rightSideConflictEls);
|
||||||
|
const leftElementObserver = visibleItemObserver(leftSideConflictEls);
|
||||||
|
|
||||||
|
const hideOverlappedSidebars = () => {
|
||||||
|
marginScrollVisibility(toRegions(rightElementObserver.getVisibleEntries()));
|
||||||
|
sidebarScrollVisiblity(toRegions(leftElementObserver.getVisibleEntries()));
|
||||||
|
if (tocLeftScrollVisibility) {
|
||||||
|
tocLeftScrollVisibility(
|
||||||
|
toRegions(leftElementObserver.getVisibleEntries())
|
||||||
|
);
|
||||||
|
}
|
||||||
|
};
|
||||||
|
|
||||||
|
window.quartoToggleReader = () => {
|
||||||
|
// Applies a slow class (or removes it)
|
||||||
|
// to update the transition speed
|
||||||
|
const slowTransition = (slow) => {
|
||||||
|
const manageTransition = (id, slow) => {
|
||||||
|
const el = document.getElementById(id);
|
||||||
|
if (el) {
|
||||||
|
if (slow) {
|
||||||
|
el.classList.add("slow");
|
||||||
|
} else {
|
||||||
|
el.classList.remove("slow");
|
||||||
|
}
|
||||||
|
}
|
||||||
|
};
|
||||||
|
|
||||||
|
manageTransition("TOC", slow);
|
||||||
|
manageTransition("quarto-sidebar", slow);
|
||||||
|
};
|
||||||
|
const readerMode = !isReaderMode();
|
||||||
|
setReaderModeValue(readerMode);
|
||||||
|
|
||||||
|
// If we're entering reader mode, slow the transition
|
||||||
|
if (readerMode) {
|
||||||
|
slowTransition(readerMode);
|
||||||
|
}
|
||||||
|
highlightReaderToggle(readerMode);
|
||||||
|
hideOverlappedSidebars();
|
||||||
|
|
||||||
|
// If we're exiting reader mode, restore the non-slow transition
|
||||||
|
if (!readerMode) {
|
||||||
|
slowTransition(!readerMode);
|
||||||
|
}
|
||||||
|
};
|
||||||
|
|
||||||
|
const highlightReaderToggle = (readerMode) => {
|
||||||
|
const els = document.querySelectorAll(".quarto-reader-toggle");
|
||||||
|
if (els) {
|
||||||
|
els.forEach((el) => {
|
||||||
|
if (readerMode) {
|
||||||
|
el.classList.add("reader");
|
||||||
|
} else {
|
||||||
|
el.classList.remove("reader");
|
||||||
|
}
|
||||||
|
});
|
||||||
|
}
|
||||||
|
};
|
||||||
|
|
||||||
|
const setReaderModeValue = (val) => {
|
||||||
|
if (window.location.protocol !== "file:") {
|
||||||
|
window.localStorage.setItem("quarto-reader-mode", val);
|
||||||
|
} else {
|
||||||
|
localReaderMode = val;
|
||||||
|
}
|
||||||
|
};
|
||||||
|
|
||||||
|
const isReaderMode = () => {
|
||||||
|
if (window.location.protocol !== "file:") {
|
||||||
|
return window.localStorage.getItem("quarto-reader-mode") === "true";
|
||||||
|
} else {
|
||||||
|
return localReaderMode;
|
||||||
|
}
|
||||||
|
};
|
||||||
|
let localReaderMode = null;
|
||||||
|
|
||||||
|
const tocOpenDepthStr = tocEl?.getAttribute("data-toc-expanded");
|
||||||
|
const tocOpenDepth = tocOpenDepthStr ? Number(tocOpenDepthStr) : 1;
|
||||||
|
|
||||||
|
// Walk the TOC and collapse/expand nodes
|
||||||
|
// Nodes are expanded if:
|
||||||
|
// - they are top level
|
||||||
|
// - they have children that are 'active' links
|
||||||
|
// - they are directly below an link that is 'active'
|
||||||
|
const walk = (el, depth) => {
|
||||||
|
// Tick depth when we enter a UL
|
||||||
|
if (el.tagName === "UL") {
|
||||||
|
depth = depth + 1;
|
||||||
|
}
|
||||||
|
|
||||||
|
// It this is active link
|
||||||
|
let isActiveNode = false;
|
||||||
|
if (el.tagName === "A" && el.classList.contains("active")) {
|
||||||
|
isActiveNode = true;
|
||||||
|
}
|
||||||
|
|
||||||
|
// See if there is an active child to this element
|
||||||
|
let hasActiveChild = false;
|
||||||
|
for (const child of el.children) {
|
||||||
|
hasActiveChild = walk(child, depth) || hasActiveChild;
|
||||||
|
}
|
||||||
|
|
||||||
|
// Process the collapse state if this is an UL
|
||||||
|
if (el.tagName === "UL") {
|
||||||
|
if (tocOpenDepth === -1 && depth > 1) {
|
||||||
|
// toc-expand: false
|
||||||
|
el.classList.add("collapse");
|
||||||
|
} else if (
|
||||||
|
depth <= tocOpenDepth ||
|
||||||
|
hasActiveChild ||
|
||||||
|
prevSiblingIsActiveLink(el)
|
||||||
|
) {
|
||||||
|
el.classList.remove("collapse");
|
||||||
|
} else {
|
||||||
|
el.classList.add("collapse");
|
||||||
|
}
|
||||||
|
|
||||||
|
// untick depth when we leave a UL
|
||||||
|
depth = depth - 1;
|
||||||
|
}
|
||||||
|
return hasActiveChild || isActiveNode;
|
||||||
|
};
|
||||||
|
|
||||||
|
// walk the TOC and expand / collapse any items that should be shown
|
||||||
|
if (tocEl) {
|
||||||
|
updateActiveLink();
|
||||||
|
walk(tocEl, 0);
|
||||||
|
}
|
||||||
|
|
||||||
|
// Throttle the scroll event and walk peridiocally
|
||||||
|
window.document.addEventListener(
|
||||||
|
"scroll",
|
||||||
|
throttle(() => {
|
||||||
|
if (tocEl) {
|
||||||
|
updateActiveLink();
|
||||||
|
walk(tocEl, 0);
|
||||||
|
}
|
||||||
|
if (!isReaderMode()) {
|
||||||
|
hideOverlappedSidebars();
|
||||||
|
}
|
||||||
|
}, 5)
|
||||||
|
);
|
||||||
|
window.addEventListener(
|
||||||
|
"resize",
|
||||||
|
throttle(() => {
|
||||||
|
if (tocEl) {
|
||||||
|
updateActiveLink();
|
||||||
|
walk(tocEl, 0);
|
||||||
|
}
|
||||||
|
if (!isReaderMode()) {
|
||||||
|
hideOverlappedSidebars();
|
||||||
|
}
|
||||||
|
}, 10)
|
||||||
|
);
|
||||||
|
hideOverlappedSidebars();
|
||||||
|
highlightReaderToggle(isReaderMode());
|
||||||
|
});
|
||||||
|
|
||||||
|
tabsets.init();
|
||||||
|
|
||||||
|
function throttle(func, wait) {
|
||||||
|
let waiting = false;
|
||||||
|
return function () {
|
||||||
|
if (!waiting) {
|
||||||
|
func.apply(this, arguments);
|
||||||
|
waiting = true;
|
||||||
|
setTimeout(function () {
|
||||||
|
waiting = false;
|
||||||
|
}, wait);
|
||||||
|
}
|
||||||
|
};
|
||||||
|
}
|
||||||
|
|
||||||
|
function nexttick(func) {
|
||||||
|
return setTimeout(func, 0);
|
||||||
|
}
|
||||||
95
site_libs/quarto-html/tabsets/tabsets.js
Normal file
95
site_libs/quarto-html/tabsets/tabsets.js
Normal file
|
|
@ -0,0 +1,95 @@
|
||||||
|
// grouped tabsets
|
||||||
|
|
||||||
|
export function init() {
|
||||||
|
window.addEventListener("pageshow", (_event) => {
|
||||||
|
function getTabSettings() {
|
||||||
|
const data = localStorage.getItem("quarto-persistent-tabsets-data");
|
||||||
|
if (!data) {
|
||||||
|
localStorage.setItem("quarto-persistent-tabsets-data", "{}");
|
||||||
|
return {};
|
||||||
|
}
|
||||||
|
if (data) {
|
||||||
|
return JSON.parse(data);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
function setTabSettings(data) {
|
||||||
|
localStorage.setItem(
|
||||||
|
"quarto-persistent-tabsets-data",
|
||||||
|
JSON.stringify(data)
|
||||||
|
);
|
||||||
|
}
|
||||||
|
|
||||||
|
function setTabState(groupName, groupValue) {
|
||||||
|
const data = getTabSettings();
|
||||||
|
data[groupName] = groupValue;
|
||||||
|
setTabSettings(data);
|
||||||
|
}
|
||||||
|
|
||||||
|
function toggleTab(tab, active) {
|
||||||
|
const tabPanelId = tab.getAttribute("aria-controls");
|
||||||
|
const tabPanel = document.getElementById(tabPanelId);
|
||||||
|
if (active) {
|
||||||
|
tab.classList.add("active");
|
||||||
|
tabPanel.classList.add("active");
|
||||||
|
} else {
|
||||||
|
tab.classList.remove("active");
|
||||||
|
tabPanel.classList.remove("active");
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
function toggleAll(selectedGroup, selectorsToSync) {
|
||||||
|
for (const [thisGroup, tabs] of Object.entries(selectorsToSync)) {
|
||||||
|
const active = selectedGroup === thisGroup;
|
||||||
|
for (const tab of tabs) {
|
||||||
|
toggleTab(tab, active);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
function findSelectorsToSyncByLanguage() {
|
||||||
|
const result = {};
|
||||||
|
const tabs = Array.from(
|
||||||
|
document.querySelectorAll(`div[data-group] a[id^='tabset-']`)
|
||||||
|
);
|
||||||
|
for (const item of tabs) {
|
||||||
|
const div = item.parentElement.parentElement.parentElement;
|
||||||
|
const group = div.getAttribute("data-group");
|
||||||
|
if (!result[group]) {
|
||||||
|
result[group] = {};
|
||||||
|
}
|
||||||
|
const selectorsToSync = result[group];
|
||||||
|
const value = item.innerHTML;
|
||||||
|
if (!selectorsToSync[value]) {
|
||||||
|
selectorsToSync[value] = [];
|
||||||
|
}
|
||||||
|
selectorsToSync[value].push(item);
|
||||||
|
}
|
||||||
|
return result;
|
||||||
|
}
|
||||||
|
|
||||||
|
function setupSelectorSync() {
|
||||||
|
const selectorsToSync = findSelectorsToSyncByLanguage();
|
||||||
|
Object.entries(selectorsToSync).forEach(([group, tabSetsByValue]) => {
|
||||||
|
Object.entries(tabSetsByValue).forEach(([value, items]) => {
|
||||||
|
items.forEach((item) => {
|
||||||
|
item.addEventListener("click", (_event) => {
|
||||||
|
setTabState(group, value);
|
||||||
|
toggleAll(value, selectorsToSync[group]);
|
||||||
|
});
|
||||||
|
});
|
||||||
|
});
|
||||||
|
});
|
||||||
|
return selectorsToSync;
|
||||||
|
}
|
||||||
|
|
||||||
|
const selectorsToSync = setupSelectorSync();
|
||||||
|
for (const [group, selectedName] of Object.entries(getTabSettings())) {
|
||||||
|
const selectors = selectorsToSync[group];
|
||||||
|
// it's possible that stale state gives us empty selections, so we explicitly check here.
|
||||||
|
if (selectors) {
|
||||||
|
toggleAll(selectedName, selectors);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
});
|
||||||
|
}
|
||||||
1
site_libs/quarto-html/tippy.css
Normal file
1
site_libs/quarto-html/tippy.css
Normal file
|
|
@ -0,0 +1 @@
|
||||||
|
.tippy-box[data-animation=fade][data-state=hidden]{opacity:0}[data-tippy-root]{max-width:calc(100vw - 10px)}.tippy-box{position:relative;background-color:#333;color:#fff;border-radius:4px;font-size:14px;line-height:1.4;white-space:normal;outline:0;transition-property:transform,visibility,opacity}.tippy-box[data-placement^=top]>.tippy-arrow{bottom:0}.tippy-box[data-placement^=top]>.tippy-arrow:before{bottom:-7px;left:0;border-width:8px 8px 0;border-top-color:initial;transform-origin:center top}.tippy-box[data-placement^=bottom]>.tippy-arrow{top:0}.tippy-box[data-placement^=bottom]>.tippy-arrow:before{top:-7px;left:0;border-width:0 8px 8px;border-bottom-color:initial;transform-origin:center bottom}.tippy-box[data-placement^=left]>.tippy-arrow{right:0}.tippy-box[data-placement^=left]>.tippy-arrow:before{border-width:8px 0 8px 8px;border-left-color:initial;right:-7px;transform-origin:center left}.tippy-box[data-placement^=right]>.tippy-arrow{left:0}.tippy-box[data-placement^=right]>.tippy-arrow:before{left:-7px;border-width:8px 8px 8px 0;border-right-color:initial;transform-origin:center right}.tippy-box[data-inertia][data-state=visible]{transition-timing-function:cubic-bezier(.54,1.5,.38,1.11)}.tippy-arrow{width:16px;height:16px;color:#333}.tippy-arrow:before{content:"";position:absolute;border-color:transparent;border-style:solid}.tippy-content{position:relative;padding:5px 9px;z-index:1}
|
||||||
2
site_libs/quarto-html/tippy.umd.min.js
vendored
Normal file
2
site_libs/quarto-html/tippy.umd.min.js
vendored
Normal file
File diff suppressed because one or more lines are too long
2
site_libs/quarto-listing/list.min.js
vendored
Normal file
2
site_libs/quarto-listing/list.min.js
vendored
Normal file
File diff suppressed because one or more lines are too long
254
site_libs/quarto-listing/quarto-listing.js
Normal file
254
site_libs/quarto-listing/quarto-listing.js
Normal file
|
|
@ -0,0 +1,254 @@
|
||||||
|
const kProgressiveAttr = "data-src";
|
||||||
|
let categoriesLoaded = false;
|
||||||
|
|
||||||
|
window.quartoListingCategory = (category) => {
|
||||||
|
// category is URI encoded in EJS template for UTF-8 support
|
||||||
|
category = decodeURIComponent(atob(category));
|
||||||
|
if (categoriesLoaded) {
|
||||||
|
activateCategory(category);
|
||||||
|
setCategoryHash(category);
|
||||||
|
}
|
||||||
|
};
|
||||||
|
|
||||||
|
window["quarto-listing-loaded"] = () => {
|
||||||
|
// Process any existing hash
|
||||||
|
const hash = getHash();
|
||||||
|
|
||||||
|
if (hash) {
|
||||||
|
// If there is a category, switch to that
|
||||||
|
if (hash.category) {
|
||||||
|
// category hash are URI encoded so we need to decode it before processing
|
||||||
|
// so that we can match it with the category element processed in JS
|
||||||
|
activateCategory(decodeURIComponent(hash.category));
|
||||||
|
}
|
||||||
|
// Paginate a specific listing
|
||||||
|
const listingIds = Object.keys(window["quarto-listings"]);
|
||||||
|
for (const listingId of listingIds) {
|
||||||
|
const page = hash[getListingPageKey(listingId)];
|
||||||
|
if (page) {
|
||||||
|
showPage(listingId, page);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
const listingIds = Object.keys(window["quarto-listings"]);
|
||||||
|
for (const listingId of listingIds) {
|
||||||
|
// The actual list
|
||||||
|
const list = window["quarto-listings"][listingId];
|
||||||
|
|
||||||
|
// Update the handlers for pagination events
|
||||||
|
refreshPaginationHandlers(listingId);
|
||||||
|
|
||||||
|
// Render any visible items that need it
|
||||||
|
renderVisibleProgressiveImages(list);
|
||||||
|
|
||||||
|
// Whenever the list is updated, we also need to
|
||||||
|
// attach handlers to the new pagination elements
|
||||||
|
// and refresh any newly visible items.
|
||||||
|
list.on("updated", function () {
|
||||||
|
renderVisibleProgressiveImages(list);
|
||||||
|
setTimeout(() => refreshPaginationHandlers(listingId));
|
||||||
|
|
||||||
|
// Show or hide the no matching message
|
||||||
|
toggleNoMatchingMessage(list);
|
||||||
|
});
|
||||||
|
}
|
||||||
|
};
|
||||||
|
|
||||||
|
window.document.addEventListener("DOMContentLoaded", function (_event) {
|
||||||
|
// Attach click handlers to categories
|
||||||
|
const categoryEls = window.document.querySelectorAll(
|
||||||
|
".quarto-listing-category .category"
|
||||||
|
);
|
||||||
|
|
||||||
|
for (const categoryEl of categoryEls) {
|
||||||
|
// category needs to support non ASCII characters
|
||||||
|
const category = decodeURIComponent(
|
||||||
|
atob(categoryEl.getAttribute("data-category"))
|
||||||
|
);
|
||||||
|
categoryEl.onclick = () => {
|
||||||
|
activateCategory(category);
|
||||||
|
setCategoryHash(category);
|
||||||
|
};
|
||||||
|
}
|
||||||
|
|
||||||
|
// Attach a click handler to the category title
|
||||||
|
// (there should be only one, but since it is a class name, handle N)
|
||||||
|
const categoryTitleEls = window.document.querySelectorAll(
|
||||||
|
".quarto-listing-category-title"
|
||||||
|
);
|
||||||
|
for (const categoryTitleEl of categoryTitleEls) {
|
||||||
|
categoryTitleEl.onclick = () => {
|
||||||
|
activateCategory("");
|
||||||
|
setCategoryHash("");
|
||||||
|
};
|
||||||
|
}
|
||||||
|
|
||||||
|
categoriesLoaded = true;
|
||||||
|
});
|
||||||
|
|
||||||
|
function toggleNoMatchingMessage(list) {
|
||||||
|
const selector = `#${list.listContainer.id} .listing-no-matching`;
|
||||||
|
const noMatchingEl = window.document.querySelector(selector);
|
||||||
|
if (noMatchingEl) {
|
||||||
|
if (list.visibleItems.length === 0) {
|
||||||
|
noMatchingEl.classList.remove("d-none");
|
||||||
|
} else {
|
||||||
|
if (!noMatchingEl.classList.contains("d-none")) {
|
||||||
|
noMatchingEl.classList.add("d-none");
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
function setCategoryHash(category) {
|
||||||
|
setHash({ category });
|
||||||
|
}
|
||||||
|
|
||||||
|
function setPageHash(listingId, page) {
|
||||||
|
const currentHash = getHash() || {};
|
||||||
|
currentHash[getListingPageKey(listingId)] = page;
|
||||||
|
setHash(currentHash);
|
||||||
|
}
|
||||||
|
|
||||||
|
function getListingPageKey(listingId) {
|
||||||
|
return `${listingId}-page`;
|
||||||
|
}
|
||||||
|
|
||||||
|
function refreshPaginationHandlers(listingId) {
|
||||||
|
const listingEl = window.document.getElementById(listingId);
|
||||||
|
const paginationEls = listingEl.querySelectorAll(
|
||||||
|
".pagination li.page-item:not(.disabled) .page.page-link"
|
||||||
|
);
|
||||||
|
for (const paginationEl of paginationEls) {
|
||||||
|
paginationEl.onclick = (sender) => {
|
||||||
|
setPageHash(listingId, sender.target.getAttribute("data-i"));
|
||||||
|
showPage(listingId, sender.target.getAttribute("data-i"));
|
||||||
|
return false;
|
||||||
|
};
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
function renderVisibleProgressiveImages(list) {
|
||||||
|
// Run through the visible items and render any progressive images
|
||||||
|
for (const item of list.visibleItems) {
|
||||||
|
const itemEl = item.elm;
|
||||||
|
if (itemEl) {
|
||||||
|
const progressiveImgs = itemEl.querySelectorAll(
|
||||||
|
`img[${kProgressiveAttr}]`
|
||||||
|
);
|
||||||
|
for (const progressiveImg of progressiveImgs) {
|
||||||
|
const srcValue = progressiveImg.getAttribute(kProgressiveAttr);
|
||||||
|
if (srcValue) {
|
||||||
|
progressiveImg.setAttribute("src", srcValue);
|
||||||
|
}
|
||||||
|
progressiveImg.removeAttribute(kProgressiveAttr);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
function getHash() {
|
||||||
|
// Hashes are of the form
|
||||||
|
// #name:value|name1:value1|name2:value2
|
||||||
|
const currentUrl = new URL(window.location);
|
||||||
|
const hashRaw = currentUrl.hash ? currentUrl.hash.slice(1) : undefined;
|
||||||
|
return parseHash(hashRaw);
|
||||||
|
}
|
||||||
|
|
||||||
|
const kAnd = "&";
|
||||||
|
const kEquals = "=";
|
||||||
|
|
||||||
|
function parseHash(hash) {
|
||||||
|
if (!hash) {
|
||||||
|
return undefined;
|
||||||
|
}
|
||||||
|
const hasValuesStrs = hash.split(kAnd);
|
||||||
|
const hashValues = hasValuesStrs
|
||||||
|
.map((hashValueStr) => {
|
||||||
|
const vals = hashValueStr.split(kEquals);
|
||||||
|
if (vals.length === 2) {
|
||||||
|
return { name: vals[0], value: vals[1] };
|
||||||
|
} else {
|
||||||
|
return undefined;
|
||||||
|
}
|
||||||
|
})
|
||||||
|
.filter((value) => {
|
||||||
|
return value !== undefined;
|
||||||
|
});
|
||||||
|
|
||||||
|
const hashObj = {};
|
||||||
|
hashValues.forEach((hashValue) => {
|
||||||
|
hashObj[hashValue.name] = decodeURIComponent(hashValue.value);
|
||||||
|
});
|
||||||
|
return hashObj;
|
||||||
|
}
|
||||||
|
|
||||||
|
function makeHash(obj) {
|
||||||
|
return Object.keys(obj)
|
||||||
|
.map((key) => {
|
||||||
|
return `${key}${kEquals}${obj[key]}`;
|
||||||
|
})
|
||||||
|
.join(kAnd);
|
||||||
|
}
|
||||||
|
|
||||||
|
function setHash(obj) {
|
||||||
|
const hash = makeHash(obj);
|
||||||
|
window.history.pushState(null, null, `#${hash}`);
|
||||||
|
}
|
||||||
|
|
||||||
|
function showPage(listingId, page) {
|
||||||
|
const list = window["quarto-listings"][listingId];
|
||||||
|
if (list) {
|
||||||
|
list.show((page - 1) * list.page + 1, list.page);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
function activateCategory(category) {
|
||||||
|
// Deactivate existing categories
|
||||||
|
const activeEls = window.document.querySelectorAll(
|
||||||
|
".quarto-listing-category .category.active"
|
||||||
|
);
|
||||||
|
for (const activeEl of activeEls) {
|
||||||
|
activeEl.classList.remove("active");
|
||||||
|
}
|
||||||
|
|
||||||
|
// Activate this category
|
||||||
|
const categoryEl = window.document.querySelector(
|
||||||
|
`.quarto-listing-category .category[data-category='${btoa(
|
||||||
|
encodeURIComponent(category)
|
||||||
|
)}']`
|
||||||
|
);
|
||||||
|
if (categoryEl) {
|
||||||
|
categoryEl.classList.add("active");
|
||||||
|
}
|
||||||
|
|
||||||
|
// Filter the listings to this category
|
||||||
|
filterListingCategory(category);
|
||||||
|
}
|
||||||
|
|
||||||
|
function filterListingCategory(category) {
|
||||||
|
const listingIds = Object.keys(window["quarto-listings"]);
|
||||||
|
for (const listingId of listingIds) {
|
||||||
|
const list = window["quarto-listings"][listingId];
|
||||||
|
if (list) {
|
||||||
|
if (category === "") {
|
||||||
|
// resets the filter
|
||||||
|
list.filter();
|
||||||
|
} else {
|
||||||
|
// filter to this category
|
||||||
|
list.filter(function (item) {
|
||||||
|
const itemValues = item.values();
|
||||||
|
if (itemValues.categories !== null) {
|
||||||
|
const categories = decodeURIComponent(
|
||||||
|
atob(itemValues.categories)
|
||||||
|
).split(",");
|
||||||
|
return categories.includes(category);
|
||||||
|
} else {
|
||||||
|
return false;
|
||||||
|
}
|
||||||
|
});
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
7
site_libs/quarto-nav/headroom.min.js
vendored
Normal file
7
site_libs/quarto-nav/headroom.min.js
vendored
Normal file
|
|
@ -0,0 +1,7 @@
|
||||||
|
/*!
|
||||||
|
* headroom.js v0.12.0 - Give your page some headroom. Hide your header until you need it
|
||||||
|
* Copyright (c) 2020 Nick Williams - http://wicky.nillia.ms/headroom.js
|
||||||
|
* License: MIT
|
||||||
|
*/
|
||||||
|
|
||||||
|
!function(t,n){"object"==typeof exports&&"undefined"!=typeof module?module.exports=n():"function"==typeof define&&define.amd?define(n):(t=t||self).Headroom=n()}(this,function(){"use strict";function t(){return"undefined"!=typeof window}function d(t){return function(t){return t&&t.document&&function(t){return 9===t.nodeType}(t.document)}(t)?function(t){var n=t.document,o=n.body,s=n.documentElement;return{scrollHeight:function(){return Math.max(o.scrollHeight,s.scrollHeight,o.offsetHeight,s.offsetHeight,o.clientHeight,s.clientHeight)},height:function(){return t.innerHeight||s.clientHeight||o.clientHeight},scrollY:function(){return void 0!==t.pageYOffset?t.pageYOffset:(s||o.parentNode||o).scrollTop}}}(t):function(t){return{scrollHeight:function(){return Math.max(t.scrollHeight,t.offsetHeight,t.clientHeight)},height:function(){return Math.max(t.offsetHeight,t.clientHeight)},scrollY:function(){return t.scrollTop}}}(t)}function n(t,s,e){var n,o=function(){var n=!1;try{var t={get passive(){n=!0}};window.addEventListener("test",t,t),window.removeEventListener("test",t,t)}catch(t){n=!1}return n}(),i=!1,r=d(t),l=r.scrollY(),a={};function c(){var t=Math.round(r.scrollY()),n=r.height(),o=r.scrollHeight();a.scrollY=t,a.lastScrollY=l,a.direction=l<t?"down":"up",a.distance=Math.abs(t-l),a.isOutOfBounds=t<0||o<t+n,a.top=t<=s.offset[a.direction],a.bottom=o<=t+n,a.toleranceExceeded=a.distance>s.tolerance[a.direction],e(a),l=t,i=!1}function h(){i||(i=!0,n=requestAnimationFrame(c))}var u=!!o&&{passive:!0,capture:!1};return t.addEventListener("scroll",h,u),c(),{destroy:function(){cancelAnimationFrame(n),t.removeEventListener("scroll",h,u)}}}function o(t){return t===Object(t)?t:{down:t,up:t}}function s(t,n){n=n||{},Object.assign(this,s.options,n),this.classes=Object.assign({},s.options.classes,n.classes),this.elem=t,this.tolerance=o(this.tolerance),this.offset=o(this.offset),this.initialised=!1,this.frozen=!1}return s.prototype={constructor:s,init:function(){return s.cutsTheMustard&&!this.initialised&&(this.addClass("initial"),this.initialised=!0,setTimeout(function(t){t.scrollTracker=n(t.scroller,{offset:t.offset,tolerance:t.tolerance},t.update.bind(t))},100,this)),this},destroy:function(){this.initialised=!1,Object.keys(this.classes).forEach(this.removeClass,this),this.scrollTracker.destroy()},unpin:function(){!this.hasClass("pinned")&&this.hasClass("unpinned")||(this.addClass("unpinned"),this.removeClass("pinned"),this.onUnpin&&this.onUnpin.call(this))},pin:function(){this.hasClass("unpinned")&&(this.addClass("pinned"),this.removeClass("unpinned"),this.onPin&&this.onPin.call(this))},freeze:function(){this.frozen=!0,this.addClass("frozen")},unfreeze:function(){this.frozen=!1,this.removeClass("frozen")},top:function(){this.hasClass("top")||(this.addClass("top"),this.removeClass("notTop"),this.onTop&&this.onTop.call(this))},notTop:function(){this.hasClass("notTop")||(this.addClass("notTop"),this.removeClass("top"),this.onNotTop&&this.onNotTop.call(this))},bottom:function(){this.hasClass("bottom")||(this.addClass("bottom"),this.removeClass("notBottom"),this.onBottom&&this.onBottom.call(this))},notBottom:function(){this.hasClass("notBottom")||(this.addClass("notBottom"),this.removeClass("bottom"),this.onNotBottom&&this.onNotBottom.call(this))},shouldUnpin:function(t){return"down"===t.direction&&!t.top&&t.toleranceExceeded},shouldPin:function(t){return"up"===t.direction&&t.toleranceExceeded||t.top},addClass:function(t){this.elem.classList.add.apply(this.elem.classList,this.classes[t].split(" "))},removeClass:function(t){this.elem.classList.remove.apply(this.elem.classList,this.classes[t].split(" "))},hasClass:function(t){return this.classes[t].split(" ").every(function(t){return this.classList.contains(t)},this.elem)},update:function(t){t.isOutOfBounds||!0!==this.frozen&&(t.top?this.top():this.notTop(),t.bottom?this.bottom():this.notBottom(),this.shouldUnpin(t)?this.unpin():this.shouldPin(t)&&this.pin())}},s.options={tolerance:{up:0,down:0},offset:0,scroller:t()?window:null,classes:{frozen:"headroom--frozen",pinned:"headroom--pinned",unpinned:"headroom--unpinned",top:"headroom--top",notTop:"headroom--not-top",bottom:"headroom--bottom",notBottom:"headroom--not-bottom",initial:"headroom"}},s.cutsTheMustard=!!(t()&&function(){}.bind&&"classList"in document.documentElement&&Object.assign&&Object.keys&&requestAnimationFrame),s});
|
||||||
325
site_libs/quarto-nav/quarto-nav.js
Normal file
325
site_libs/quarto-nav/quarto-nav.js
Normal file
|
|
@ -0,0 +1,325 @@
|
||||||
|
const headroomChanged = new CustomEvent("quarto-hrChanged", {
|
||||||
|
detail: {},
|
||||||
|
bubbles: true,
|
||||||
|
cancelable: false,
|
||||||
|
composed: false,
|
||||||
|
});
|
||||||
|
|
||||||
|
const announceDismiss = () => {
|
||||||
|
const annEl = window.document.getElementById("quarto-announcement");
|
||||||
|
if (annEl) {
|
||||||
|
annEl.remove();
|
||||||
|
|
||||||
|
const annId = annEl.getAttribute("data-announcement-id");
|
||||||
|
window.localStorage.setItem(`quarto-announce-${annId}`, "true");
|
||||||
|
}
|
||||||
|
};
|
||||||
|
|
||||||
|
const announceRegister = () => {
|
||||||
|
const annEl = window.document.getElementById("quarto-announcement");
|
||||||
|
if (annEl) {
|
||||||
|
const annId = annEl.getAttribute("data-announcement-id");
|
||||||
|
const isDismissed =
|
||||||
|
window.localStorage.getItem(`quarto-announce-${annId}`) || false;
|
||||||
|
if (isDismissed) {
|
||||||
|
announceDismiss();
|
||||||
|
return;
|
||||||
|
} else {
|
||||||
|
annEl.classList.remove("hidden");
|
||||||
|
}
|
||||||
|
|
||||||
|
const actionEl = annEl.querySelector(".quarto-announcement-action");
|
||||||
|
if (actionEl) {
|
||||||
|
actionEl.addEventListener("click", function (e) {
|
||||||
|
e.preventDefault();
|
||||||
|
// Hide the bar immediately
|
||||||
|
announceDismiss();
|
||||||
|
});
|
||||||
|
}
|
||||||
|
}
|
||||||
|
};
|
||||||
|
|
||||||
|
window.document.addEventListener("DOMContentLoaded", function () {
|
||||||
|
let init = false;
|
||||||
|
|
||||||
|
announceRegister();
|
||||||
|
|
||||||
|
// Manage the back to top button, if one is present.
|
||||||
|
let lastScrollTop = window.pageYOffset || document.documentElement.scrollTop;
|
||||||
|
const scrollDownBuffer = 5;
|
||||||
|
const scrollUpBuffer = 35;
|
||||||
|
const btn = document.getElementById("quarto-back-to-top");
|
||||||
|
const hideBackToTop = () => {
|
||||||
|
btn.style.display = "none";
|
||||||
|
};
|
||||||
|
const showBackToTop = () => {
|
||||||
|
btn.style.display = "inline-block";
|
||||||
|
};
|
||||||
|
if (btn) {
|
||||||
|
window.document.addEventListener(
|
||||||
|
"scroll",
|
||||||
|
function () {
|
||||||
|
const currentScrollTop =
|
||||||
|
window.pageYOffset || document.documentElement.scrollTop;
|
||||||
|
|
||||||
|
// Shows and hides the button 'intelligently' as the user scrolls
|
||||||
|
if (currentScrollTop - scrollDownBuffer > lastScrollTop) {
|
||||||
|
hideBackToTop();
|
||||||
|
lastScrollTop = currentScrollTop <= 0 ? 0 : currentScrollTop;
|
||||||
|
} else if (currentScrollTop < lastScrollTop - scrollUpBuffer) {
|
||||||
|
showBackToTop();
|
||||||
|
lastScrollTop = currentScrollTop <= 0 ? 0 : currentScrollTop;
|
||||||
|
}
|
||||||
|
|
||||||
|
// Show the button at the bottom, hides it at the top
|
||||||
|
if (currentScrollTop <= 0) {
|
||||||
|
hideBackToTop();
|
||||||
|
} else if (
|
||||||
|
window.innerHeight + currentScrollTop >=
|
||||||
|
document.body.offsetHeight
|
||||||
|
) {
|
||||||
|
showBackToTop();
|
||||||
|
}
|
||||||
|
},
|
||||||
|
false
|
||||||
|
);
|
||||||
|
}
|
||||||
|
|
||||||
|
function throttle(func, wait) {
|
||||||
|
var timeout;
|
||||||
|
return function () {
|
||||||
|
const context = this;
|
||||||
|
const args = arguments;
|
||||||
|
const later = function () {
|
||||||
|
clearTimeout(timeout);
|
||||||
|
timeout = null;
|
||||||
|
func.apply(context, args);
|
||||||
|
};
|
||||||
|
|
||||||
|
if (!timeout) {
|
||||||
|
timeout = setTimeout(later, wait);
|
||||||
|
}
|
||||||
|
};
|
||||||
|
}
|
||||||
|
|
||||||
|
function headerOffset() {
|
||||||
|
// Set an offset if there is are fixed top navbar
|
||||||
|
const headerEl = window.document.querySelector("header.fixed-top");
|
||||||
|
if (headerEl) {
|
||||||
|
return headerEl.clientHeight;
|
||||||
|
} else {
|
||||||
|
return 0;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
function footerOffset() {
|
||||||
|
const footerEl = window.document.querySelector("footer.footer");
|
||||||
|
if (footerEl) {
|
||||||
|
return footerEl.clientHeight;
|
||||||
|
} else {
|
||||||
|
return 0;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
function dashboardOffset() {
|
||||||
|
const dashboardNavEl = window.document.getElementById(
|
||||||
|
"quarto-dashboard-header"
|
||||||
|
);
|
||||||
|
if (dashboardNavEl !== null) {
|
||||||
|
return dashboardNavEl.clientHeight;
|
||||||
|
} else {
|
||||||
|
return 0;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
function updateDocumentOffsetWithoutAnimation() {
|
||||||
|
updateDocumentOffset(false);
|
||||||
|
}
|
||||||
|
|
||||||
|
function updateDocumentOffset(animated) {
|
||||||
|
// set body offset
|
||||||
|
const topOffset = headerOffset();
|
||||||
|
const bodyOffset = topOffset + footerOffset() + dashboardOffset();
|
||||||
|
const bodyEl = window.document.body;
|
||||||
|
bodyEl.setAttribute("data-bs-offset", topOffset);
|
||||||
|
bodyEl.style.paddingTop = topOffset + "px";
|
||||||
|
|
||||||
|
// deal with sidebar offsets
|
||||||
|
const sidebars = window.document.querySelectorAll(
|
||||||
|
".sidebar, .headroom-target"
|
||||||
|
);
|
||||||
|
sidebars.forEach((sidebar) => {
|
||||||
|
if (!animated) {
|
||||||
|
sidebar.classList.add("notransition");
|
||||||
|
// Remove the no transition class after the animation has time to complete
|
||||||
|
setTimeout(function () {
|
||||||
|
sidebar.classList.remove("notransition");
|
||||||
|
}, 201);
|
||||||
|
}
|
||||||
|
|
||||||
|
if (window.Headroom && sidebar.classList.contains("sidebar-unpinned")) {
|
||||||
|
sidebar.style.top = "0";
|
||||||
|
sidebar.style.maxHeight = "100vh";
|
||||||
|
} else {
|
||||||
|
sidebar.style.top = topOffset + "px";
|
||||||
|
sidebar.style.maxHeight = "calc(100vh - " + topOffset + "px)";
|
||||||
|
}
|
||||||
|
});
|
||||||
|
|
||||||
|
// allow space for footer
|
||||||
|
const mainContainer = window.document.querySelector(".quarto-container");
|
||||||
|
if (mainContainer) {
|
||||||
|
mainContainer.style.minHeight = "calc(100vh - " + bodyOffset + "px)";
|
||||||
|
}
|
||||||
|
|
||||||
|
// link offset
|
||||||
|
let linkStyle = window.document.querySelector("#quarto-target-style");
|
||||||
|
if (!linkStyle) {
|
||||||
|
linkStyle = window.document.createElement("style");
|
||||||
|
linkStyle.setAttribute("id", "quarto-target-style");
|
||||||
|
window.document.head.appendChild(linkStyle);
|
||||||
|
}
|
||||||
|
while (linkStyle.firstChild) {
|
||||||
|
linkStyle.removeChild(linkStyle.firstChild);
|
||||||
|
}
|
||||||
|
if (topOffset > 0) {
|
||||||
|
linkStyle.appendChild(
|
||||||
|
window.document.createTextNode(`
|
||||||
|
section:target::before {
|
||||||
|
content: "";
|
||||||
|
display: block;
|
||||||
|
height: ${topOffset}px;
|
||||||
|
margin: -${topOffset}px 0 0;
|
||||||
|
}`)
|
||||||
|
);
|
||||||
|
}
|
||||||
|
if (init) {
|
||||||
|
window.dispatchEvent(headroomChanged);
|
||||||
|
}
|
||||||
|
init = true;
|
||||||
|
}
|
||||||
|
|
||||||
|
// initialize headroom
|
||||||
|
var header = window.document.querySelector("#quarto-header");
|
||||||
|
if (header && window.Headroom) {
|
||||||
|
const headroom = new window.Headroom(header, {
|
||||||
|
tolerance: 5,
|
||||||
|
onPin: function () {
|
||||||
|
const sidebars = window.document.querySelectorAll(
|
||||||
|
".sidebar, .headroom-target"
|
||||||
|
);
|
||||||
|
sidebars.forEach((sidebar) => {
|
||||||
|
sidebar.classList.remove("sidebar-unpinned");
|
||||||
|
});
|
||||||
|
updateDocumentOffset();
|
||||||
|
},
|
||||||
|
onUnpin: function () {
|
||||||
|
const sidebars = window.document.querySelectorAll(
|
||||||
|
".sidebar, .headroom-target"
|
||||||
|
);
|
||||||
|
sidebars.forEach((sidebar) => {
|
||||||
|
sidebar.classList.add("sidebar-unpinned");
|
||||||
|
});
|
||||||
|
updateDocumentOffset();
|
||||||
|
},
|
||||||
|
});
|
||||||
|
headroom.init();
|
||||||
|
|
||||||
|
let frozen = false;
|
||||||
|
window.quartoToggleHeadroom = function () {
|
||||||
|
if (frozen) {
|
||||||
|
headroom.unfreeze();
|
||||||
|
frozen = false;
|
||||||
|
} else {
|
||||||
|
headroom.freeze();
|
||||||
|
frozen = true;
|
||||||
|
}
|
||||||
|
};
|
||||||
|
}
|
||||||
|
|
||||||
|
window.addEventListener(
|
||||||
|
"hashchange",
|
||||||
|
function (e) {
|
||||||
|
if (
|
||||||
|
getComputedStyle(document.documentElement).scrollBehavior !== "smooth"
|
||||||
|
) {
|
||||||
|
window.scrollTo(0, window.pageYOffset - headerOffset());
|
||||||
|
}
|
||||||
|
},
|
||||||
|
false
|
||||||
|
);
|
||||||
|
|
||||||
|
// Observe size changed for the header
|
||||||
|
const headerEl = window.document.querySelector("header.fixed-top");
|
||||||
|
if (headerEl && window.ResizeObserver) {
|
||||||
|
const observer = new window.ResizeObserver(() => {
|
||||||
|
setTimeout(updateDocumentOffsetWithoutAnimation, 0);
|
||||||
|
});
|
||||||
|
observer.observe(headerEl, {
|
||||||
|
attributes: true,
|
||||||
|
childList: true,
|
||||||
|
characterData: true,
|
||||||
|
});
|
||||||
|
} else {
|
||||||
|
window.addEventListener(
|
||||||
|
"resize",
|
||||||
|
throttle(updateDocumentOffsetWithoutAnimation, 50)
|
||||||
|
);
|
||||||
|
}
|
||||||
|
setTimeout(updateDocumentOffsetWithoutAnimation, 250);
|
||||||
|
|
||||||
|
// fixup index.html links if we aren't on the filesystem
|
||||||
|
if (window.location.protocol !== "file:") {
|
||||||
|
const links = window.document.querySelectorAll("a");
|
||||||
|
for (let i = 0; i < links.length; i++) {
|
||||||
|
if (links[i].href) {
|
||||||
|
links[i].dataset.originalHref = links[i].href;
|
||||||
|
links[i].href = links[i].href.replace(/\/index\.html/, "/");
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
// Fixup any sharing links that require urls
|
||||||
|
// Append url to any sharing urls
|
||||||
|
const sharingLinks = window.document.querySelectorAll(
|
||||||
|
"a.sidebar-tools-main-item, a.quarto-navigation-tool, a.quarto-navbar-tools, a.quarto-navbar-tools-item"
|
||||||
|
);
|
||||||
|
for (let i = 0; i < sharingLinks.length; i++) {
|
||||||
|
const sharingLink = sharingLinks[i];
|
||||||
|
const href = sharingLink.getAttribute("href");
|
||||||
|
if (href) {
|
||||||
|
sharingLink.setAttribute(
|
||||||
|
"href",
|
||||||
|
href.replace("|url|", window.location.href)
|
||||||
|
);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
// Scroll the active navigation item into view, if necessary
|
||||||
|
const navSidebar = window.document.querySelector("nav#quarto-sidebar");
|
||||||
|
if (navSidebar) {
|
||||||
|
// Find the active item
|
||||||
|
const activeItem = navSidebar.querySelector("li.sidebar-item a.active");
|
||||||
|
if (activeItem) {
|
||||||
|
// Wait for the scroll height and height to resolve by observing size changes on the
|
||||||
|
// nav element that is scrollable
|
||||||
|
const resizeObserver = new ResizeObserver((_entries) => {
|
||||||
|
// The bottom of the element
|
||||||
|
const elBottom = activeItem.offsetTop;
|
||||||
|
const viewBottom = navSidebar.scrollTop + navSidebar.clientHeight;
|
||||||
|
|
||||||
|
// The element height and scroll height are the same, then we are still loading
|
||||||
|
if (viewBottom !== navSidebar.scrollHeight) {
|
||||||
|
// Determine if the item isn't visible and scroll to it
|
||||||
|
if (elBottom >= viewBottom) {
|
||||||
|
navSidebar.scrollTop = elBottom;
|
||||||
|
}
|
||||||
|
|
||||||
|
// stop observing now since we've completed the scroll
|
||||||
|
resizeObserver.unobserve(navSidebar);
|
||||||
|
}
|
||||||
|
});
|
||||||
|
resizeObserver.observe(navSidebar);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
});
|
||||||
3
site_libs/quarto-search/autocomplete.umd.js
Normal file
3
site_libs/quarto-search/autocomplete.umd.js
Normal file
File diff suppressed because one or more lines are too long
9
site_libs/quarto-search/fuse.min.js
vendored
Normal file
9
site_libs/quarto-search/fuse.min.js
vendored
Normal file
File diff suppressed because one or more lines are too long
1290
site_libs/quarto-search/quarto-search.js
Normal file
1290
site_libs/quarto-search/quarto-search.js
Normal file
File diff suppressed because it is too large
Load diff
4452
suivi/2025-13/2025-13.html
Normal file
4452
suivi/2025-13/2025-13.html
Normal file
File diff suppressed because one or more lines are too long
BIN
suivi/2025-13/figs/baldock_meso_iid.png
Normal file
BIN
suivi/2025-13/figs/baldock_meso_iid.png
Normal file
Binary file not shown.
|
After Width: | Height: | Size: 206 KiB |
BIN
suivi/2025-13/figs/baldock_meso_pi.png
Normal file
BIN
suivi/2025-13/figs/baldock_meso_pi.png
Normal file
Binary file not shown.
|
After Width: | Height: | Size: 228 KiB |
BIN
suivi/2025-13/figs/baldock_meso_pirho.png
Normal file
BIN
suivi/2025-13/figs/baldock_meso_pirho.png
Normal file
Binary file not shown.
|
After Width: | Height: | Size: 139 KiB |
BIN
suivi/2025-13/figs/baldock_meso_rho.png
Normal file
BIN
suivi/2025-13/figs/baldock_meso_rho.png
Normal file
Binary file not shown.
|
After Width: | Height: | Size: 241 KiB |
BIN
suivi/2025-13/figs/clear_links.png
Normal file
BIN
suivi/2025-13/figs/clear_links.png
Normal file
Binary file not shown.
|
After Width: | Height: | Size: 89 KiB |
BIN
suivi/2025-13/figs/noisy_alpha.png
Normal file
BIN
suivi/2025-13/figs/noisy_alpha.png
Normal file
Binary file not shown.
|
After Width: | Height: | Size: 72 KiB |
BIN
suivi/2025-13/figs/noisy_links.png
Normal file
BIN
suivi/2025-13/figs/noisy_links.png
Normal file
Binary file not shown.
|
After Width: | Height: | Size: 86 KiB |
4409
suivi/2025-14/2025-14.html
Normal file
4409
suivi/2025-14/2025-14.html
Normal file
File diff suppressed because one or more lines are too long
4406
suivi/2025-15/2025-15.html
Normal file
4406
suivi/2025-15/2025-15.html
Normal file
File diff suppressed because one or more lines are too long
BIN
suivi/2025-15/figs/alluvial-clusterings.png
Normal file
BIN
suivi/2025-15/figs/alluvial-clusterings.png
Normal file
Binary file not shown.
|
After Width: | Height: | Size: 281 KiB |
4404
suivi/2025-16/2025-16.html
Normal file
4404
suivi/2025-16/2025-16.html
Normal file
File diff suppressed because one or more lines are too long
4505
suivi/2025-17/2025-17.html
Normal file
4505
suivi/2025-17/2025-17.html
Normal file
File diff suppressed because one or more lines are too long
BIN
suivi/2025-17/figs/density-subdore.png
Normal file
BIN
suivi/2025-17/figs/density-subdore.png
Normal file
Binary file not shown.
|
After Width: | Height: | Size: 55 KiB |
Binary file not shown.
|
After Width: | Height: | Size: 252 KiB |
Binary file not shown.
|
After Width: | Height: | Size: 236 KiB |
Binary file not shown.
|
After Width: | Height: | Size: 222 KiB |
Binary file not shown.
|
After Width: | Height: | Size: 240 KiB |
Binary file not shown.
|
After Width: | Height: | Size: 273 KiB |
Loading…
Add table
Reference in a new issue