Commit graph

108 commits

Author SHA1 Message Date
1cdedcb657 Merge branch 'main' of github.com:Polarolouis/anova-phylogenetique-projet-msv 2024-03-12 17:18:13 +01:00
53b781066e Ajout paragraphes sur BM et ANOVA phylo 2024-03-12 17:18:10 +01:00
29a937f52d Debut traavail fonction génération arbre phylo selon BM 2024-03-12 17:17:53 +01:00
f021d2ee97 Ajout paragraphe sur gènes diff exprimés 2024-03-12 17:17:17 +01:00
AzGeffroy
ba2684bd64 Merge branch 'main' of https://github.com/Polarolouis/anova-phylogenetique-projet-msv 2024-03-12 16:09:14 +01:00
AzGeffroy
96cdf0d324 🐛 finish last derivative and paragraph + modify todo 2024-03-12 16:07:37 +01:00
AzGeffroy
c24811047f 🐛 fix formule log(det) and add TODO 2024-03-12 14:52:42 +01:00
4d1d690e5e 🦋Ajout des simulations et recalculs données réelles avec Hessienne exacte 2024-03-12 13:03:16 +01:00
c4c132f902 Calcul Hessienne exact 2024-03-12 13:02:35 +01:00
3b0c109f56 Ajout des fichiers de simus, manque l'enregistrement des données donc échoue 2024-03-12 11:12:43 +01:00
c8c45e4f48 🖊️Refactored utils.R 2024-03-12 11:06:19 +01:00
c1de0ed378 🦋Begin adding sims 2024-03-11 18:08:58 +01:00
AzGeffroy
12e30910be 💥 Add Satterthwaite demo in LateX 2024-03-11 18:01:15 +01:00
48a1f99210 🐛Correction de l'absence du package ape 2024-03-11 14:04:38 +01:00
7e052ea215 Ajout commentaire REML, à rédiger 2024-03-08 14:32:38 +01:00
1950793e18 🐛Fixing issue with package installation 2024-03-08 14:32:08 +01:00
71b844d5f5 Remise en forme tableau NA gènes données réelles 2024-03-06 11:49:45 +01:00
90454295bf 1ere mise en forme et application aux données réelles 2024-03-06 11:41:34 +01:00
d1051fe5d1 Merge branch 'main' of https://github.com/Polarolouis/anova-phylogenetique-projet-msv 2024-03-06 09:40:35 +01:00
7276fc08dc Reworked 2024-03-06 09:39:09 +01:00
6bcce4bf6c Removed ignored rapport.tex 2024-03-05 15:51:53 +01:00
bb3b2667f2 Added rapport.tex to gitignore as working on rapport.Rnw 2024-03-05 15:51:20 +01:00
12d6e51645 Use library instead of require 2024-03-05 15:49:29 +01:00
32a137cc4e 📖 Déplacement de section et réorganisation rapport
Co-authored-by: AzGeffroy <AzGeffroy@users.noreply.github.com>
2024-03-05 15:49:09 +01:00
8f2e6f6c4b 🤖 Adding lintr config file 2024-03-05 11:38:22 +01:00
17671e583a Removing unnecessary files 2024-03-05 11:25:55 +01:00
8a7a7522f3 🌟 Adding the report on the repo 2024-03-05 11:24:48 +01:00
9f6208aa75 Fixing filepaths using here package 2024-03-05 11:24:20 +01:00
7ef36c8c62 Updating gitignore file 2024-03-05 11:23:32 +01:00
971c8a49cb Modifications from last meeting 2024-02-29 15:44:16 +01:00
0e427396b5 Preparing for report, adding R Sweave files 2024-02-29 15:43:42 +01:00
5a5a6db767 Added EVE models analysis 2024-02-21 19:37:07 +01:00
6f1364a3f4 All for Rmd 2024-02-21 17:28:48 +01:00
ae87240e2b Création du Rmd 2024-02-21 16:17:42 +01:00
7a70f5b24d Diagramme de Venn 2024-02-21 16:14:08 +01:00
6ef1bed74f Mise en forme 2024-02-21 16:13:49 +01:00
c87e981fef Import modules et données 2024-02-21 16:13:20 +01:00
f2ec8c9e5b Merge branch 'main' of github.com:Polarolouis/anova-phylogenetique-projet-msv 2024-02-21 14:56:53 +01:00
da0c23912f Images 2024-02-21 14:53:28 +01:00
Paul Bastide
f3bb5bba45 Try using REML on chen simu data. 2024-02-13 16:17:57 +01:00
e922c98836 Applied our methods to data and adjusted pvalues 2024-02-11 19:22:31 +01:00
846f3316ea 📝Correcting missing tree parameter 2024-02-11 19:22:08 +01:00
e4668fc341 Saving work on anovaComparison 2024-02-11 18:39:22 +01:00
0cad78d968 📝Extract pvalue computations 2024-02-11 18:30:32 +01:00
08e4af1241 realTree simu images 2024-02-10 18:36:07 +01:00
b4384acc39 Adding realTree simulations 2024-02-10 18:35:58 +01:00
87f38972ae Images 2024-02-10 18:20:59 +01:00
9b4c5f7a86 Moving simulation functions in utils and adapting it for more than two groups 2024-02-10 18:20:45 +01:00
a7aee4f382 Begin working on real tree data 2024-02-10 15:41:42 +01:00
e1b9cfea28 Cosmetic 2024-02-10 15:41:31 +01:00